Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm28729A0A1B0GSW2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Gm28729A0A1B0GSW2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Gm28729A0A1B0GSW2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28729A0A1B0GSW2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28729A0A1B0GSW2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Gm28729A0A1B0GSW2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28729A0A1B0GSW2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm28729A0A1B0GSW2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Birc2-201ENSMUST00000054878 378 ntBASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm28729A0A1B0GSW2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28729A0A1B0GSW2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28729A0A1B0GSW2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm28729A0A1B0GSW2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms