Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trbv17A0A140T8P8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trbv17A0A140T8P8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Mir1199-201ENSMUST00000117015 119 ntBASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Gm8969-201ENSMUST00000199694 526 ntBASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Gm4974-201ENSMUST00000209974 875 ntBASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trbv17A0A140T8P8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trbv17A0A140T8P8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trbv17A0A140T8P8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trbv17A0A140T8P8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trbv17A0A140T8P8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trbv17A0A140T8P8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Trbv17A0A140T8P8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv17A0A140T8P8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms