Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv26A0A0B4J1P5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv26A0A0B4J1P5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv26A0A0B4J1P5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv26A0A0B4J1P5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv26A0A0B4J1P5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm9731-201ENSMUST00000209480 747 ntBASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv26A0A0B4J1P5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm15565-201ENSMUST00000118890 427 ntBASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv26A0A0B4J1P5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms