Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav9-4A0A0B4J1K2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-4A0A0B4J1K2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-4A0A0B4J1K2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-4A0A0B4J1K2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav9-4A0A0B4J1K2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-4A0A0B4J1K2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm17661-201ENSMUST00000170317 270 ntBASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-4A0A0B4J1K2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm27463-201ENSMUST00000183569 57 ntBASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm7791-201ENSMUST00000219066 539 ntBASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-4A0A0B4J1K2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-4A0A0B4J1K2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms