Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trbv16A0A0B4J1H3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm27405-201ENSMUST00000184201 112 ntBASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trbv16A0A0B4J1H3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm8495-201ENSMUST00000188740 694 ntBASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trbv16A0A0B4J1H3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm4974-201ENSMUST00000209974 875 ntBASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv16A0A0B4J1H3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm13158-201ENSMUST00000122007 736 ntBASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv16A0A0B4J1H3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms