Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mir3081-201ENSMUST00000175305 84 ntBASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm17971-201ENSMUST00000190239 806 ntBASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm18115-201ENSMUST00000221209 621 ntBASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-42A0A0A6YY38 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Phf7-203ENSMUST00000226565 1971 ntBASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.68■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv1-42A0A0A6YY38 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv1-42A0A0A6YY38 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms