Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm22325-201ENSMUST00000158904 308 ntBASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6n-6A0A075B6B2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6n-6A0A075B6B2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Rab3c-203ENSMUST00000224180 967 ntBASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6n-6A0A075B6B2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6n-6A0A075B6B2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm13148-201ENSMUST00000118892 745 ntBASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms