Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6n-5A0A075B621 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6n-5A0A075B621 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Reep4-203ENSMUST00000226563 1444 ntBASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6n-5A0A075B621 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6n-5A0A075B621 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gm9988-201ENSMUST00000069786 435 ntBASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6n-5A0A075B621 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6n-5A0A075B621 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms