Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm24283-201ENSMUST00000104233 107 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm12550-201ENSMUST00000118478 329 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm6071-201ENSMUST00000119561 440 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm22322-201ENSMUST00000157151 111 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm24905-201ENSMUST00000158129 104 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm25051-201ENSMUST00000158602 249 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm17166-201ENSMUST00000172006 431 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm22800-201ENSMUST00000175627 94 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Trbv18-201ENSMUST00000194256 294 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm6105-201ENSMUST00000200580 624 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm44938-201ENSMUST00000208614 427 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Gm45288-201ENSMUST00000210236 151 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Mir384-201ENSMUST00000083565 88 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Mir323-201ENSMUST00000083683 86 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.38□□□□□ -2.03
H2afb3S4R1G7 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm24376-201ENSMUST00000104399 127 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm11786-201ENSMUST00000120799 155 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm26412-201ENSMUST00000157666 55 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm23190-201ENSMUST00000180307 64 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm44476-201ENSMUST00000196225 91 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm43427-201ENSMUST00000198188 331 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm18991-201ENSMUST00000209225 746 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm9370-201ENSMUST00000222787 609 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm4945-201ENSMUST00000075152 453 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Snora19-201ENSMUST00000082962 132 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm23658-201ENSMUST00000083233 132 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
H2afb3S4R1G7 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.37□□□□□ -2.03
H2afb3S4R1G7 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm22023-201ENSMUST00000104354 130 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm17113-201ENSMUST00000170118 171 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm24106-201ENSMUST00000175498 127 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm27753-201ENSMUST00000184742 203 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm37807-201ENSMUST00000194310 190 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm43217-201ENSMUST00000199513 367 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm45445-201ENSMUST00000209586 232 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Gm23615-201ENSMUST00000082602 65 ntBASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
H2afb3S4R1G7 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Mir767-201ENSMUST00000103256 107 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm26411-201ENSMUST00000157668 107 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm26482-201ENSMUST00000158015 62 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm24053-201ENSMUST00000158620 105 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Mir1936-201ENSMUST00000158699 93 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm27285-201ENSMUST00000183875 127 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm28992-201ENSMUST00000190534 139 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm24350-202ENSMUST00000198309 132 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm18188-201ENSMUST00000219386 478 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm18617-201ENSMUST00000222311 259 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm11351-202ENSMUST00000225724 478 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm25589-201ENSMUST00000082502 166 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Mir423-201ENSMUST00000083584 109 ntBASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
H2afb3S4R1G7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm25539-201ENSMUST00000116886 122 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm6954-201ENSMUST00000117416 225 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm24291-201ENSMUST00000157633 162 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm22367-201ENSMUST00000178930 132 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm27793-201ENSMUST00000183405 76 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm6060-201ENSMUST00000188671 251 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm42834-201ENSMUST00000196845 256 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 Gm5002-201ENSMUST00000207145 223 ntBASIC2.34□□□□□ -2.03
H2afb3S4R1G7 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms