Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
H2afb1S4R1E0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm15526-201ENSMUST00000112504 204 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Mir1193-201ENSMUST00000116761 121 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm13714-201ENSMUST00000117313 221 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm22159-201ENSMUST00000158412 130 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm22500-201ENSMUST00000158982 99 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Mir28b-201ENSMUST00000175399 80 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Mir7016-201ENSMUST00000184308 72 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm29167-201ENSMUST00000190024 377 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm29140-201ENSMUST00000190187 476 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm45386-201ENSMUST00000210194 218 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm45313-201ENSMUST00000210584 178 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm22571-201ENSMUST00000082984 70 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Mir193a-201ENSMUST00000083461 66 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.86□□□□□ -2.11
H2afb1S4R1E0 Gm24480-201ENSMUST00000157442 103 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm24010-201ENSMUST00000157731 282 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm25460-201ENSMUST00000157954 127 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm24053-201ENSMUST00000158620 105 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm5900-201ENSMUST00000179862 375 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm17067-202ENSMUST00000180131 123 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm37801-201ENSMUST00000194754 274 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm38019-201ENSMUST00000195133 380 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm43587-201ENSMUST00000199590 204 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Mir7215-201ENSMUST00000200383 51 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm44959-201ENSMUST00000209127 231 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm24356-201ENSMUST00000082859 106 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
H2afb1S4R1E0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.85□□□□□ -2.11
H2afb1S4R1E0 Gm15215-201ENSMUST00000117773 489 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm24896-201ENSMUST00000122741 135 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm22537-201ENSMUST00000158172 199 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Mir6993-201ENSMUST00000184912 65 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm27540-201ENSMUST00000184950 187 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm26265-202ENSMUST00000196326 133 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm44938-201ENSMUST00000208614 427 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm29818-201ENSMUST00000218070 165 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Gm24163-201ENSMUST00000093660 132 ntBASIC1.84□□□□□ -2.11
H2afb1S4R1E0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
H2afb1S4R1E0 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm24116-201ENSMUST00000103975 107 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm24274-201ENSMUST00000116787 124 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm22193-201ENSMUST00000116868 76 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm11904-201ENSMUST00000120562 248 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm14919-201ENSMUST00000120839 390 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm22215-201ENSMUST00000157558 96 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm25863-201ENSMUST00000158249 329 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm26214-201ENSMUST00000158581 107 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm25488-201ENSMUST00000158728 118 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm23342-201ENSMUST00000158958 115 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm25996-201ENSMUST00000175393 117 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm19901-201ENSMUST00000192191 495 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Mir3535-201ENSMUST00000197651 147 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Mir1291-201ENSMUST00000199842 117 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm44666-201ENSMUST00000208544 391 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm24355-201ENSMUST00000082858 122 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Snora34-201ENSMUST00000083402 138 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.83□□□□□ -2.12
H2afb1S4R1E0 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm27271-201ENSMUST00000183509 170 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm27747-201ENSMUST00000184707 85 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Mir6376-201ENSMUST00000185149 131 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm20144-201ENSMUST00000203031 165 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm44564-201ENSMUST00000207985 180 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm26497-201ENSMUST00000083146 107 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm23246-201ENSMUST00000083371 67 ntBASIC1.82□□□□□ -2.12
H2afb1S4R1E0 Gm24098-201ENSMUST00000102075 109 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms