Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mir701-201ENSMUST00000102208 109 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Mir653-201ENSMUST00000102402 85 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm14937-201ENSMUST00000119709 208 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm26049-201ENSMUST00000157313 108 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Snord13-201ENSMUST00000157627 104 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm24288-201ENSMUST00000157630 144 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm23016-201ENSMUST00000158431 62 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm24551-201ENSMUST00000158645 92 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm45403-201ENSMUST00000209453 276 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm24536-201ENSMUST00000083144 107 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.27□□□□□ -2.21
Cldn9Q9Z0S7 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm14392-201ENSMUST00000120332 401 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm14287-201ENSMUST00000121060 117 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm14413-201ENSMUST00000122158 408 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm24632-201ENSMUST00000122770 323 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm23535-201ENSMUST00000157542 106 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Mir6985-201ENSMUST00000184641 61 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm28995-201ENSMUST00000186625 261 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm28200-201ENSMUST00000187778 315 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm29378-201ENSMUST00000188723 315 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm28909-201ENSMUST00000189406 315 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm43723-201ENSMUST00000196886 189 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Gm35736-201ENSMUST00000203681 313 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.26□□□□□ -2.21
Cldn9Q9Z0S7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm11359-201ENSMUST00000120039 567 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm14269-201ENSMUST00000120455 306 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm26435-201ENSMUST00000179026 107 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm28343-201ENSMUST00000185386 112 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm23731-201ENSMUST00000083749 107 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.25□□□□□ -2.21
Cldn9Q9Z0S7 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Snord71-201ENSMUST00000104361 85 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm26301-201ENSMUST00000104813 95 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Snord98-201ENSMUST00000116819 65 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm15529-201ENSMUST00000121833 994 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm27926-201ENSMUST00000157180 66 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm23329-201ENSMUST00000157415 108 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm25486-201ENSMUST00000158726 63 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm25314-201ENSMUST00000178810 79 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm25253-201ENSMUST00000179958 107 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Mir7059-201ENSMUST00000184825 59 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm29037-201ENSMUST00000189092 313 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm26265-202ENSMUST00000196326 133 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm44491-201ENSMUST00000196794 96 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm23370-201ENSMUST00000199545 130 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm38395-201ENSMUST00000199904 830 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm43993-201ENSMUST00000203972 247 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm45402-201ENSMUST00000211796 223 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm5899-201ENSMUST00000071770 270 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.24□□□□□ -2.21
Cldn9Q9Z0S7 Gm11386-201ENSMUST00000117761 347 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm12225-201ENSMUST00000117995 298 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm23390-201ENSMUST00000157393 106 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm24005-201ENSMUST00000158459 296 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm23208-201ENSMUST00000158666 127 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm24085-201ENSMUST00000175172 116 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm44483-201ENSMUST00000197203 97 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm45456-201ENSMUST00000210841 243 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Snord68-201ENSMUST00000082516 86 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm25801-201ENSMUST00000082638 106 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Snord14a-201ENSMUST00000082807 87 ntBASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cldn9Q9Z0S7 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Gm25491-201ENSMUST00000158733 308 ntBASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Gm27656-201ENSMUST00000185055 80 ntBASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.22□□□□□ -2.21
Cldn9Q9Z0S7 Gm10092-201ENSMUST00000077110 180 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 150 ms