Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm14362-201ENSMUST00000121679 273 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm15529-201ENSMUST00000121833 994 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm14364-201ENSMUST00000129209 267 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm15254-201ENSMUST00000149567 273 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm25375-201ENSMUST00000158157 135 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm17054-201ENSMUST00000169811 259 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm21673-201ENSMUST00000186640 436 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm21135-201ENSMUST00000189023 436 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm29490-201ENSMUST00000190923 342 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm37713-201ENSMUST00000191746 198 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm17911-201ENSMUST00000210806 877 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm18703-201ENSMUST00000215318 333 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Gm24208-201ENSMUST00000082783 135 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 Mir340-201ENSMUST00000083483 98 ntBASIC0.42□□□□□ -2.34
Scn8aQ9WTU3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm12507-201ENSMUST00000119155 415 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm26914-201ENSMUST00000182262 223 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm19901-201ENSMUST00000192191 495 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm23453-201ENSMUST00000083326 106 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm22543-201ENSMUST00000104347 94 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm22477-201ENSMUST00000122569 316 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm25269-201ENSMUST00000122601 104 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm24306-201ENSMUST00000180229 79 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm42570-201ENSMUST00000195937 292 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.41□□□□□ -2.34
Scn8aQ9WTU3 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm23106-201ENSMUST00000157554 101 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm24288-201ENSMUST00000157630 144 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm24401-201ENSMUST00000157868 91 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm23151-201ENSMUST00000178061 107 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm28912-201ENSMUST00000189001 234 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm37693-201ENSMUST00000194562 234 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm44254-201ENSMUST00000204184 322 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm24921-201ENSMUST00000083024 107 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm22704-201ENSMUST00000083027 137 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm25578-201ENSMUST00000083406 104 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm23503-201ENSMUST00000083903 107 ntBASIC0.4□□□□□ -2.35
Scn8aQ9WTU3 Gm22279-201ENSMUST00000157200 93 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm20874-201ENSMUST00000178356 663 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm28409-201ENSMUST00000187064 103 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm22884-201ENSMUST00000083127 140 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm14638-201ENSMUST00000121338 216 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm24747-201ENSMUST00000157835 87 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm27607-201ENSMUST00000185162 122 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm44449-201ENSMUST00000203610 153 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm24494-201ENSMUST00000083804 81 ntBASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Scn8aQ9WTU3 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm14765-201ENSMUST00000121954 326 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm25706-201ENSMUST00000157828 247 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm22328-201ENSMUST00000158074 112 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Scn8aQ9WTU3 Gm23981-201ENSMUST00000157136 106 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm7925-201ENSMUST00000166690 401 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm24625-201ENSMUST00000082622 130 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm25131-201ENSMUST00000082653 151 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm24340-201ENSMUST00000104208 97 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm4732-201ENSMUST00000118778 473 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm13804-201ENSMUST00000119552 172 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm15077-201ENSMUST00000122344 362 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm25557-201ENSMUST00000158084 315 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm26378-201ENSMUST00000179093 107 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm44465-201ENSMUST00000199536 114 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm34783-201ENSMUST00000209159 303 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Gm25138-201ENSMUST00000083248 136 ntBASIC0.37□□□□□ -2.35
Scn8aQ9WTU3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
Scn8aQ9WTU3 Mir695-201ENSMUST00000102261 109 ntBASIC0.36□□□□□ -2.35
Scn8aQ9WTU3 Gm26421-201ENSMUST00000104279 132 ntBASIC0.36□□□□□ -2.35
Scn8aQ9WTU3 Gm25497-201ENSMUST00000104425 132 ntBASIC0.36□□□□□ -2.35
Scn8aQ9WTU3 Gm26249-201ENSMUST00000116708 118 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms