Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm23080-201ENSMUST00000157846 103 ntBASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 Mir6914-201ENSMUST00000184999 69 ntBASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
Prpf40aQ9R1C7 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm24581-201ENSMUST00000103962 133 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm23671-201ENSMUST00000157472 103 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm25572-201ENSMUST00000157527 172 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm23381-201ENSMUST00000157676 94 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm29613-201ENSMUST00000185846 313 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm29544-201ENSMUST00000188860 313 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm28808-201ENSMUST00000190978 313 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm38364-201ENSMUST00000191814 179 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm44666-201ENSMUST00000208544 391 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm21007-201ENSMUST00000221024 326 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.7□□□□□ -1.82
Prpf40aQ9R1C7 Mir374b-201ENSMUST00000102314 95 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm25272-201ENSMUST00000104293 128 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm22105-201ENSMUST00000116734 116 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm18546-201ENSMUST00000197245 676 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm45080-201ENSMUST00000206648 283 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Gm23095-201ENSMUST00000083446 107 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Mir340-201ENSMUST00000083483 98 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.69□□□□□ -1.82
Prpf40aQ9R1C7 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm22658-201ENSMUST00000104196 155 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm22612-201ENSMUST00000158293 101 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm25519-201ENSMUST00000158392 127 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm24573-201ENSMUST00000175499 112 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm28169-201ENSMUST00000190342 345 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm24461-201ENSMUST00000082735 103 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Mir101b-201ENSMUST00000083622 97 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm10161-201ENSMUST00000091506 204 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
Prpf40aQ9R1C7 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm23530-201ENSMUST00000104564 137 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm13862-201ENSMUST00000121220 197 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm12276-201ENSMUST00000121709 301 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm22380-201ENSMUST00000157479 95 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm23588-201ENSMUST00000157659 99 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm24010-201ENSMUST00000157731 282 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm24008-201ENSMUST00000157733 138 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm23858-201ENSMUST00000158384 106 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm24553-201ENSMUST00000158653 131 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm45456-201ENSMUST00000210841 243 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Gm23925-201ENSMUST00000082471 132 ntBASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Prpf40aQ9R1C7 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm24926-201ENSMUST00000178053 79 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm22632-201ENSMUST00000178266 79 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm18486-201ENSMUST00000184040 298 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm28912-201ENSMUST00000189001 234 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm21064-202ENSMUST00000190583 278 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm44326-201ENSMUST00000198226 101 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Gm25987-201ENSMUST00000083234 107 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.66□□□□□ -1.82
Prpf40aQ9R1C7 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Prpf40aQ9R1C7 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Prpf40aQ9R1C7 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms