Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 AC158598.1-201ENSMUST00000214349 3847 ntBASIC3.65□□□□□ -1.83
Nubp1Q9R060 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nubp1Q9R060 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Nubp1Q9R060 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Nubp1Q9R060 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm24127-201ENSMUST00000104110 130 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm14946-201ENSMUST00000119859 296 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm12013-201ENSMUST00000121971 155 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm23253-201ENSMUST00000157441 104 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm25910-201ENSMUST00000157620 140 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Mir6408-201ENSMUST00000183643 91 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm37330-201ENSMUST00000192606 153 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm19366-201ENSMUST00000206996 156 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm22304-201ENSMUST00000082688 129 ntBASIC3.64□□□□□ -1.83
Nubp1Q9R060 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC3.64□□□□□ -1.83
Nubp1Q9R060 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm15180-201ENSMUST00000117745 492 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm12571-201ENSMUST00000118132 243 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm12276-201ENSMUST00000121709 301 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm23588-201ENSMUST00000157659 99 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm37104-201ENSMUST00000193278 196 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.63□□□□□ -1.83
Nubp1Q9R060 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm22306-201ENSMUST00000082692 107 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 Gm23443-201ENSMUST00000082916 128 ntBASIC3.63□□□□□ -1.83
Nubp1Q9R060 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm22658-201ENSMUST00000104196 155 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm13386-201ENSMUST00000117677 124 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm14687-201ENSMUST00000120206 363 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm24559-201ENSMUST00000157519 121 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm24314-201ENSMUST00000158274 123 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm23113-201ENSMUST00000158477 99 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Gm22950-201ENSMUST00000082776 107 ntBASIC3.62□□□□□ -1.83
Nubp1Q9R060 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Nubp1Q9R060 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Nubp1Q9R060 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm22497-201ENSMUST00000104499 131 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm25447-201ENSMUST00000158997 128 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm10067-201ENSMUST00000179462 348 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Mir6385-201ENSMUST00000184295 105 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm27457-201ENSMUST00000184771 156 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Snora7a-201ENSMUST00000082629 140 ntBASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Nubp1Q9R060 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Gm25091-201ENSMUST00000103997 71 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 Gm26387-201ENSMUST00000104238 132 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 Gm24376-201ENSMUST00000104399 127 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Gm14709-201ENSMUST00000121225 304 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Mir7682-201ENSMUST00000198467 58 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.6□□□□□ -1.83
Nubp1Q9R060 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Nubp1Q9R060 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm26074-201ENSMUST00000104063 129 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm25272-201ENSMUST00000104293 128 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm3788-201ENSMUST00000119949 136 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm22141-201ENSMUST00000157403 277 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm23152-201ENSMUST00000175322 116 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Gm45245-201ENSMUST00000210082 376 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 AC127371.3-201ENSMUST00000228129 415 ntBASIC3.59□□□□□ -1.83
Nubp1Q9R060 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Nubp1Q9R060 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms