Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm22771-201ENSMUST00000104449 91 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Gm11389-201ENSMUST00000121407 430 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Gm25836-201ENSMUST00000158918 123 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Gm24177-201ENSMUST00000158927 131 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Mir8119-201ENSMUST00000183371 129 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.06□□□□□ -2.24
Trem1Q9JKE2 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.06□□□□□ -2.24
Trem1Q9JKE2 Gm24431-201ENSMUST00000104073 66 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Mir669d-201ENSMUST00000104644 121 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm22281-201ENSMUST00000157198 103 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm25392-201ENSMUST00000157335 297 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm22803-201ENSMUST00000158049 283 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm22841-201ENSMUST00000158443 62 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm16584-201ENSMUST00000159267 189 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm11392-201ENSMUST00000181419 710 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm27919-201ENSMUST00000185163 107 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm29640-201ENSMUST00000187972 278 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm9251-201ENSMUST00000197202 628 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm42857-201ENSMUST00000200823 339 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm45403-201ENSMUST00000209453 276 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.05□□□□□ -2.24
Trem1Q9JKE2 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Snord98-201ENSMUST00000116819 65 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm24438-201ENSMUST00000157893 115 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Mir5104-201ENSMUST00000175319 94 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm28257-201ENSMUST00000185244 463 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm28343-201ENSMUST00000185386 112 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm38280-201ENSMUST00000192610 158 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm45268-201ENSMUST00000210046 370 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.04□□□□□ -2.24
Trem1Q9JKE2 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.04□□□□□ -2.24
Trem1Q9JKE2 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm22935-201ENSMUST00000103960 104 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trem1Q9JKE2 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm23391-201ENSMUST00000157579 104 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm38041-201ENSMUST00000194445 661 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trem1Q9JKE2 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm25207-201ENSMUST00000093745 107 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.03□□□□□ -2.24
Trem1Q9JKE2 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm12143-201ENSMUST00000119666 332 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm26049-201ENSMUST00000157313 108 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm22233-201ENSMUST00000157464 114 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm25868-201ENSMUST00000158253 114 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm25831-201ENSMUST00000158924 163 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm22403-201ENSMUST00000174919 84 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm24799-201ENSMUST00000178431 79 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm27959-201ENSMUST00000185172 111 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm28414-201ENSMUST00000190111 294 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm22980-201ENSMUST00000082608 70 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm26922-201ENSMUST00000082687 72 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm23055-201ENSMUST00000082805 94 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm24038-201ENSMUST00000082872 159 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.02□□□□□ -2.25
Trem1Q9JKE2 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm14287-201ENSMUST00000121060 117 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm24221-201ENSMUST00000158833 313 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm17148-201ENSMUST00000164702 249 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm27420-201ENSMUST00000183823 79 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm26224-201ENSMUST00000082506 80 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm24261-201ENSMUST00000083744 104 ntBASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trem1Q9JKE2 Gm14293-201ENSMUST00000118528 577 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm3027-201ENSMUST00000167579 451 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm24618-201ENSMUST00000177718 94 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm23953-201ENSMUST00000178214 94 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm26332-201ENSMUST00000179813 94 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm22863-201ENSMUST00000180265 94 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm27271-201ENSMUST00000183509 170 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm28344-201ENSMUST00000185704 279 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm18185-201ENSMUST00000186725 667 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm37128-201ENSMUST00000192599 232 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm43602-201ENSMUST00000196772 300 ntBASIC1□□□□□ -2.25
Trem1Q9JKE2 Gm45296-201ENSMUST00000209625 205 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms