Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm35212-201ENSMUST00000196672 606 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm42719-201ENSMUST00000197393 355 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
Trem3Q9JKE1 Gm26377-201ENSMUST00000102184 108 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm23130-201ENSMUST00000104252 74 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm11862-201ENSMUST00000119678 659 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm23981-201ENSMUST00000157136 106 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm22328-201ENSMUST00000158074 112 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm22163-201ENSMUST00000158408 135 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Mir15a-201ENSMUST00000175266 84 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.33□□□□□ -2.36
Trem3Q9JKE1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm44830-201ENSMUST00000207667 584 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.33□□□□□ -2.36
Trem3Q9JKE1 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.33□□□□□ -2.36
Trem3Q9JKE1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm13153-201ENSMUST00000120969 637 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm11334-201ENSMUST00000121969 156 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm26358-201ENSMUST00000158215 97 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm24726-201ENSMUST00000158232 121 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm25901-201ENSMUST00000158494 130 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Mir1936-201ENSMUST00000158699 93 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm27490-201ENSMUST00000184754 128 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trem3Q9JKE1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.32□□□□□ -2.36
Trem3Q9JKE1 Gm25543-201ENSMUST00000122678 312 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm24910-201ENSMUST00000157289 272 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm25884-201ENSMUST00000157782 62 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Mir3968-201ENSMUST00000175355 100 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Mir1954-201ENSMUST00000175595 86 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm23725-201ENSMUST00000177876 107 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Mir6540-201ENSMUST00000184886 108 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm11351-202ENSMUST00000225724 478 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm26457-201ENSMUST00000082678 78 ntBASIC0.31□□□□□ -2.36
Trem3Q9JKE1 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24596-201ENSMUST00000122504 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24584-201ENSMUST00000157972 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25211-201ENSMUST00000177553 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24540-201ENSMUST00000177627 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25256-201ENSMUST00000177746 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22822-201ENSMUST00000177941 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Rnu6-201ENSMUST00000178023 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23151-201ENSMUST00000178061 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25245-201ENSMUST00000178139 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24753-201ENSMUST00000178183 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25829-201ENSMUST00000178275 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22092-201ENSMUST00000178290 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24486-201ENSMUST00000178420 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23217-201ENSMUST00000178482 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26245-201ENSMUST00000178491 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23610-201ENSMUST00000178659 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23092-201ENSMUST00000178688 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25709-201ENSMUST00000178844 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25547-201ENSMUST00000178877 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25312-201ENSMUST00000178972 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24722-201ENSMUST00000179017 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22969-201ENSMUST00000179018 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25101-201ENSMUST00000179057 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26378-201ENSMUST00000179093 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24873-201ENSMUST00000179101 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23934-201ENSMUST00000179111 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22623-201ENSMUST00000179244 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25737-201ENSMUST00000179274 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22618-201ENSMUST00000179376 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24182-201ENSMUST00000179419 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24242-201ENSMUST00000179440 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24863-201ENSMUST00000179499 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25064-201ENSMUST00000179535 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm26295-201ENSMUST00000179690 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23712-201ENSMUST00000179713 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22823-201ENSMUST00000179754 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22360-201ENSMUST00000179775 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24978-201ENSMUST00000179782 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24967-201ENSMUST00000179791 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm25173-201ENSMUST00000179794 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24870-201ENSMUST00000179897 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22288-201ENSMUST00000179904 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm22645-201ENSMUST00000180010 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm24565-201ENSMUST00000180099 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23805-201ENSMUST00000180129 107 ntBASIC0.3□□□□□ -2.36
Trem3Q9JKE1 Gm23512-201ENSMUST00000180237 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms