Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 CT010506.2-201ENSMUST00000225618 183 ntBASIC-0.92□□□□□ -2.56
Smco4Q9JIS3 Gm24172-201ENSMUST00000104127 117 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm12044-201ENSMUST00000120335 213 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm26189-201ENSMUST00000179879 107 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm28412-201ENSMUST00000187243 177 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm45119-201ENSMUST00000207612 199 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 AC156560.1-201ENSMUST00000221425 256 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Gm25897-201ENSMUST00000083709 107 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.93□□□□□ -2.56
Smco4Q9JIS3 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm23956-201ENSMUST00000157211 119 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm24002-201ENSMUST00000158456 104 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm24100-201ENSMUST00000178592 79 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Mir7229-201ENSMUST00000197062 53 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm45658-201ENSMUST00000209197 580 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm46103-201ENSMUST00000217614 341 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 AC152979.4-201ENSMUST00000219893 379 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm22974-201ENSMUST00000083301 103 ntBASIC-0.94□□□□□ -2.56
Smco4Q9JIS3 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Gm25755-201ENSMUST00000083396 107 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Gm42755-201ENSMUST00000198533 1493 ntBASIC-0.95□□□□□ -2.56
Smco4Q9JIS3 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm14039-201ENSMUST00000118705 101 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm25325-201ENSMUST00000122559 86 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm26371-201ENSMUST00000157829 104 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm25839-201ENSMUST00000158921 103 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Mir7014-201ENSMUST00000183853 63 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm36946-201ENSMUST00000192706 435 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Snora75-201ENSMUST00000082903 133 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.96□□□□□ -2.56
Smco4Q9JIS3 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Gm37641-201ENSMUST00000193837 239 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.97□□□□□ -2.56
Smco4Q9JIS3 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC-0.97□□□□□ -2.57
Smco4Q9JIS3 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Gm12591-201ENSMUST00000122407 1177 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Gm43914-201ENSMUST00000203592 594 ntBASIC-0.98□□□□□ -2.57
Smco4Q9JIS3 Gm13967-201ENSMUST00000120404 380 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Mir6335-201ENSMUST00000184081 98 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm44977-201ENSMUST00000205283 420 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 AC113305.1-201ENSMUST00000214664 724 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm24261-201ENSMUST00000083744 104 ntBASIC-0.99□□□□□ -2.57
Smco4Q9JIS3 Gm6568-201ENSMUST00000122274 697 ntBASIC-1□□□□□ -2.57
Smco4Q9JIS3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC-1□□□□□ -2.57
Smco4Q9JIS3 Gm24726-201ENSMUST00000158232 121 ntBASIC-1□□□□□ -2.57
Smco4Q9JIS3 Scarna3a-201ENSMUST00000158911 140 ntBASIC-1□□□□□ -2.57
Smco4Q9JIS3 Gm22263-201ENSMUST00000180060 104 ntBASIC-1□□□□□ -2.57
Smco4Q9JIS3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-1□□□□□ -2.57
Smco4Q9JIS3 Gm24527-201ENSMUST00000082920 107 ntBASIC-1□□□□□ -2.57
Smco4Q9JIS3 Gm25885-201ENSMUST00000157779 109 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Gm20409-201ENSMUST00000173457 130 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Gm44948-201ENSMUST00000209050 149 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 AL645546.2-201ENSMUST00000224526 265 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Gm23454-201ENSMUST00000083332 133 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Gm24523-201ENSMUST00000083965 132 ntBASIC-1.01□□□□□ -2.57
Smco4Q9JIS3 Gm25750-201ENSMUST00000175483 112 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm28270-201ENSMUST00000188550 109 ntBASIC-1.02□□□□□ -2.57
Smco4Q9JIS3 Gm28328-201ENSMUST00000188869 109 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms