Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm24896-201ENSMUST00000122741 135 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm25961-201ENSMUST00000157174 135 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm27271-201ENSMUST00000183509 170 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Mir6997-201ENSMUST00000184313 71 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm19901-201ENSMUST00000192191 495 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm44564-201ENSMUST00000207985 180 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm18617-201ENSMUST00000222311 259 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm25141-201ENSMUST00000083177 107 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Snord104-201ENSMUST00000083192 70 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm26107-201ENSMUST00000083972 107 ntBASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Trim54Q9ERP3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm11854-201ENSMUST00000117839 446 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm42807-201ENSMUST00000200141 329 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Mir222-201ENSMUST00000083537 79 ntBASIC2.43□□□□□ -2.02
Trim54Q9ERP3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm11794-201ENSMUST00000119446 237 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm14837-201ENSMUST00000119688 206 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm22947-201ENSMUST00000158559 91 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm27747-201ENSMUST00000184707 85 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Mir6376-201ENSMUST00000185149 131 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.42□□□□□ -2.02
Trim54Q9ERP3 Gm22193-201ENSMUST00000116868 76 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm27540-201ENSMUST00000184950 187 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm44655-201ENSMUST00000207768 423 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm29818-201ENSMUST00000218070 165 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim54Q9ERP3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.41□□□□□ -2.02
Trim54Q9ERP3 Gm24049-201ENSMUST00000102409 100 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm14883-201ENSMUST00000120179 157 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm25115-201ENSMUST00000157187 140 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm44482-201ENSMUST00000199232 103 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm20144-201ENSMUST00000203031 165 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm43993-201ENSMUST00000203972 247 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm44989-201ENSMUST00000204749 217 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm45791-201ENSMUST00000212908 352 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm25796-201ENSMUST00000082645 163 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm23451-201ENSMUST00000083328 122 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm25124-201ENSMUST00000083345 164 ntBASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trim54Q9ERP3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm26077-201ENSMUST00000104064 123 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm25875-201ENSMUST00000104323 107 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm12417-201ENSMUST00000119153 403 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm11388-201ENSMUST00000120908 159 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Mir1898-201ENSMUST00000122643 83 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm22215-201ENSMUST00000157558 96 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm22537-201ENSMUST00000158172 199 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm6109-201ENSMUST00000223297 348 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm25930-201ENSMUST00000082785 107 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm25789-201ENSMUST00000083294 76 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm24163-201ENSMUST00000093660 132 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.39□□□□□ -2.03
Trim54Q9ERP3 Gm13714-201ENSMUST00000117313 221 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm11786-201ENSMUST00000120799 155 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm26479-201ENSMUST00000122620 106 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm25910-201ENSMUST00000157620 140 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm22315-201ENSMUST00000158010 143 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm45386-201ENSMUST00000210194 218 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm24625-201ENSMUST00000082622 130 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm22299-201ENSMUST00000082663 136 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 Gm24977-201ENSMUST00000083106 163 ntBASIC2.38□□□□□ -2.03
Trim54Q9ERP3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms