Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm25579-201ENSMUST00000083407 106 ntBASIC1.66□□□□□ -2.14
Scn4aQ9ER60 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.14
Scn4aQ9ER60 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.65□□□□□ -2.15
Scn4aQ9ER60 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Scn4aQ9ER60 Gm36953-201ENSMUST00000195295 268 ntBASIC1.65□□□□□ -2.15
Scn4aQ9ER60 Gm44010-201ENSMUST00000204432 331 ntBASIC1.65□□□□□ -2.15
Scn4aQ9ER60 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.65□□□□□ -2.15
Scn4aQ9ER60 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.65□□□□□ -2.15
Scn4aQ9ER60 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Scn4aQ9ER60 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm24338-201ENSMUST00000104205 127 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm22037-201ENSMUST00000157280 296 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm26358-201ENSMUST00000158215 97 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm24498-201ENSMUST00000158445 102 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Rnu7-201ENSMUST00000158458 62 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm23180-201ENSMUST00000158686 125 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm25284-201ENSMUST00000180345 141 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm28288-201ENSMUST00000191019 214 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Mir429-201ENSMUST00000083493 83 ntBASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn4aQ9ER60 Gm24579-201ENSMUST00000103964 144 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm23321-201ENSMUST00000104465 126 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm11786-201ENSMUST00000120799 155 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm23641-201ENSMUST00000157857 101 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm23221-201ENSMUST00000158118 93 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Mir3961-201ENSMUST00000198795 59 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm43472-201ENSMUST00000200175 154 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm11862-201ENSMUST00000119678 659 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm25269-201ENSMUST00000122601 104 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm15281-201ENSMUST00000125181 351 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm22791-201ENSMUST00000157232 145 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm26149-201ENSMUST00000157432 108 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm22338-201ENSMUST00000157715 129 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm27510-201ENSMUST00000158214 64 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Ear14-201ENSMUST00000049559 468 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm23100-201ENSMUST00000083455 141 ntBASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Scn4aQ9ER60 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Gm13396-201ENSMUST00000120617 271 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Gm11254-201ENSMUST00000122368 653 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Gm24551-201ENSMUST00000158645 92 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Gm23181-201ENSMUST00000158685 110 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Gm22997-201ENSMUST00000082845 107 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Mir22-201ENSMUST00000083595 95 ntBASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Scn4aQ9ER60 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm16242-201ENSMUST00000117741 334 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm27926-201ENSMUST00000157180 66 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm28489-201ENSMUST00000186655 316 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Mir301-201ENSMUST00000083655 86 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Mir151-201ENSMUST00000083678 68 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm25115-201ENSMUST00000157187 140 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm19932-201ENSMUST00000177033 313 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm25730-201ENSMUST00000178753 165 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm44337-201ENSMUST00000196553 114 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm45119-201ENSMUST00000207612 199 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Mir27b-201ENSMUST00000083541 73 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 Gm25207-201ENSMUST00000093745 107 ntBASIC1.61□□□□□ -2.15
Scn4aQ9ER60 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm14624-201ENSMUST00000117746 192 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm25909-201ENSMUST00000157619 121 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm24853-201ENSMUST00000158026 121 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm22510-201ENSMUST00000179304 79 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm26336-201ENSMUST00000179449 79 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm26390-201ENSMUST00000179628 79 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm27722-201ENSMUST00000183908 76 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm24625-201ENSMUST00000082622 130 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm22299-201ENSMUST00000082663 136 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Mir300-201ENSMUST00000083485 79 ntBASIC1.6□□□□□ -2.15
Scn4aQ9ER60 Gm23705-201ENSMUST00000104370 130 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm12304-201ENSMUST00000120312 385 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm14972-201ENSMUST00000121780 364 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm23169-201ENSMUST00000157157 112 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm16162-201ENSMUST00000162296 297 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm24618-201ENSMUST00000177718 94 ntBASIC1.59□□□□□ -2.15
Scn4aQ9ER60 Gm23953-201ENSMUST00000178214 94 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 250.6 ms