Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.43□□□□□ -1.86
Upf1Q9EPU0 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Gm23246-201ENSMUST00000083371 67 ntBASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Gm23040-201ENSMUST00000083869 163 ntBASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Gm10242-201ENSMUST00000090064 330 ntBASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Upf1Q9EPU0 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Upf1Q9EPU0 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Gm22989-201ENSMUST00000158313 86 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Gm22767-201ENSMUST00000158365 165 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Gm25476-201ENSMUST00000175125 185 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Gm43993-201ENSMUST00000203972 247 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Gm10360-201ENSMUST00000097219 272 ntBASIC3.42□□□□□ -1.86
Upf1Q9EPU0 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm26135-201ENSMUST00000101993 72 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm24126-201ENSMUST00000104111 106 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm24480-201ENSMUST00000157442 103 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Snord50b-201ENSMUST00000178497 72 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm29553-201ENSMUST00000189692 279 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm42834-201ENSMUST00000196845 256 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm19790-201ENSMUST00000214414 251 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.41□□□□□ -1.86
Upf1Q9EPU0 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Upf1Q9EPU0 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.4□□□□□ -1.86
Upf1Q9EPU0 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.4□□□□□ -1.86
Upf1Q9EPU0 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Upf1Q9EPU0 Gm23588-201ENSMUST00000157659 99 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm24436-201ENSMUST00000157889 302 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Snord11-201ENSMUST00000158468 84 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm23571-201ENSMUST00000180073 127 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm27585-201ENSMUST00000183717 199 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm44490-201ENSMUST00000198566 127 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.4□□□□□ -1.87
Upf1Q9EPU0 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm22622-201ENSMUST00000082870 129 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Snora19-201ENSMUST00000082962 132 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm23658-201ENSMUST00000083233 132 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Mir384-201ENSMUST00000083565 88 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.4□□□□□ -1.87
Upf1Q9EPU0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm23578-201ENSMUST00000103943 104 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm22658-201ENSMUST00000104196 155 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm26015-201ENSMUST00000104402 125 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm25500-201ENSMUST00000104426 123 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm23803-201ENSMUST00000104610 132 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm13433-201ENSMUST00000121701 240 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm25428-201ENSMUST00000157608 114 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Mir1936-201ENSMUST00000158699 93 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Mir7026-201ENSMUST00000184384 67 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Mir7017-201ENSMUST00000184894 62 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm37037-201ENSMUST00000194475 424 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm43676-201ENSMUST00000197532 540 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Upf1Q9EPU0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Mir682-201ENSMUST00000102281 96 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm25938-201ENSMUST00000104139 166 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm16032-201ENSMUST00000118534 168 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm22337-201ENSMUST00000157721 132 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm25012-201ENSMUST00000158396 164 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm17113-201ENSMUST00000170118 171 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Gm18188-201ENSMUST00000219386 478 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.38□□□□□ -1.87
Upf1Q9EPU0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Upf1Q9EPU0 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm24283-201ENSMUST00000104233 107 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm23584-201ENSMUST00000157655 129 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm28992-201ENSMUST00000190534 139 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm37918-201ENSMUST00000192071 120 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm44352-201ENSMUST00000196358 110 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm43512-201ENSMUST00000198495 176 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Gm24977-201ENSMUST00000083106 163 ntBASIC3.37□□□□□ -1.87
Upf1Q9EPU0 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Mir466p-201ENSMUST00000103925 89 ntBASIC3.36□□□□□ -1.87
Upf1Q9EPU0 Gm23950-201ENSMUST00000104026 129 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms