Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44429-201ENSMUST00000203542 186 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm10092-201ENSMUST00000077110 180 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.24□□□□□ -2.21
Cdc40Q9DC48 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Mir343-201ENSMUST00000102360 75 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm12225-201ENSMUST00000117995 298 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm12417-201ENSMUST00000119153 403 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm12309-201ENSMUST00000119889 182 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm22221-201ENSMUST00000157362 103 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Mir3968-201ENSMUST00000175355 100 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm27711-201ENSMUST00000183802 118 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm21064-202ENSMUST00000190583 278 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm37128-201ENSMUST00000192599 232 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm43723-201ENSMUST00000196886 189 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm8125-201ENSMUST00000216602 738 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.23□□□□□ -2.21
Cdc40Q9DC48 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm25423-201ENSMUST00000157609 107 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm23557-201ENSMUST00000157820 138 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Mir7059-201ENSMUST00000184825 59 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm20257-202ENSMUST00000188643 130 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm26265-202ENSMUST00000196326 133 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm44483-201ENSMUST00000197203 97 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm24977-201ENSMUST00000083106 163 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm22972-201ENSMUST00000083297 131 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Gm26164-201ENSMUST00000083793 104 ntBASIC1.22□□□□□ -2.21
Cdc40Q9DC48 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
Cdc40Q9DC48 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm14803-201ENSMUST00000117163 361 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm15443-201ENSMUST00000118947 820 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm14937-201ENSMUST00000119709 208 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm24632-201ENSMUST00000122770 323 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm23083-201ENSMUST00000157851 116 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Rnu7-201ENSMUST00000158458 62 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Traj60-201ENSMUST00000167781 54 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm24085-201ENSMUST00000175172 116 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm27539-201ENSMUST00000184971 224 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm9251-201ENSMUST00000197202 628 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm43035-201ENSMUST00000197626 517 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm45116-201ENSMUST00000207392 275 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Gm24615-201ENSMUST00000083268 113 ntBASIC1.21□□□□□ -2.22
Cdc40Q9DC48 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Cdc40Q9DC48 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Snord98-201ENSMUST00000116819 65 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm14269-201ENSMUST00000120455 306 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm12748-201ENSMUST00000120763 504 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm22537-201ENSMUST00000158172 199 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Cfap61-214ENSMUST00000167179 183 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm24154-201ENSMUST00000175261 130 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Snord118-201ENSMUST00000082965 135 ntBASIC1.2□□□□□ -2.22
Cdc40Q9DC48 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Mir374b-201ENSMUST00000102314 95 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm27926-201ENSMUST00000157180 66 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm23208-201ENSMUST00000158666 127 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm22663-201ENSMUST00000158721 102 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm22263-201ENSMUST00000180060 104 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Mir6240-201ENSMUST00000184281 117 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Mir7052-201ENSMUST00000184821 65 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm29037-201ENSMUST00000189092 313 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm37693-201ENSMUST00000194562 234 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm24624-201ENSMUST00000082617 164 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 BC022960-201ENSMUST00000119987 1815 ntBASIC1.19□□□□□ -2.22
Cdc40Q9DC48 Gm22780-201ENSMUST00000104084 132 ntBASIC1.18□□□□□ -2.22
Cdc40Q9DC48 Gm9059-201ENSMUST00000118319 183 ntBASIC1.18□□□□□ -2.22
Cdc40Q9DC48 Gm11512-201ENSMUST00000119669 663 ntBASIC1.18□□□□□ -2.22
Cdc40Q9DC48 Gm24379-201ENSMUST00000122695 86 ntBASIC1.18□□□□□ -2.22
Cdc40Q9DC48 Gm23435-201ENSMUST00000157183 156 ntBASIC1.18□□□□□ -2.22
Cdc40Q9DC48 Gm23329-201ENSMUST00000157415 108 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms