Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24172-201ENSMUST00000104127 117 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24282-201ENSMUST00000104232 66 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23390-201ENSMUST00000157393 106 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm22654-201ENSMUST00000157874 105 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24191-201ENSMUST00000157977 122 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm22166-201ENSMUST00000178419 121 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23288-201ENSMUST00000179213 121 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24390-201ENSMUST00000179578 62 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm44337-201ENSMUST00000196553 114 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23370-201ENSMUST00000199545 130 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm44282-201ENSMUST00000203199 190 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm44429-201ENSMUST00000203542 186 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm44446-201ENSMUST00000204864 255 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm35558-203ENSMUST00000222264 204 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Snord96a-201ENSMUST00000082791 81 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23448-201ENSMUST00000083151 104 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24615-201ENSMUST00000083268 113 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.97□□□□□ -2.25
Ccdc3Q9D6Y1 Gm14355-201ENSMUST00000117352 264 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm16242-201ENSMUST00000117741 334 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm14364-201ENSMUST00000129209 267 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm26278-201ENSMUST00000157098 132 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm27510-201ENSMUST00000158214 64 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm22164-201ENSMUST00000158413 106 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29640-201ENSMUST00000187972 278 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm18296-201ENSMUST00000192475 783 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm34073-201ENSMUST00000195736 212 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25586-201ENSMUST00000082499 112 ntBASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Ccdc3Q9D6Y1 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25163-201ENSMUST00000158905 104 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Snora24-201ENSMUST00000174989 130 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm24366-201ENSMUST00000175383 86 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm23523-201ENSMUST00000180190 107 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm27385-201ENSMUST00000184747 104 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29005-201ENSMUST00000186773 320 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm35736-201ENSMUST00000203681 313 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25896-201ENSMUST00000083713 136 ntBASIC0.95□□□□□ -2.26
Ccdc3Q9D6Y1 Gm11248-201ENSMUST00000119568 201 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm14766-201ENSMUST00000121689 367 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm26038-201ENSMUST00000158151 106 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm24668-201ENSMUST00000158935 104 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm17100-201ENSMUST00000168963 272 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm27421-201ENSMUST00000184729 167 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Mir195b-201ENSMUST00000184814 97 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28110-201ENSMUST00000185782 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29057-201ENSMUST00000186468 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28737-201ENSMUST00000186808 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29147-201ENSMUST00000186846 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29118-201ENSMUST00000186908 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28409-201ENSMUST00000187064 103 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28433-201ENSMUST00000187085 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29227-201ENSMUST00000187139 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28759-201ENSMUST00000187621 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28831-201ENSMUST00000187739 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29352-201ENSMUST00000188054 544 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29034-201ENSMUST00000188099 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28752-201ENSMUST00000188340 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28569-201ENSMUST00000188748 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28120-201ENSMUST00000188812 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28369-201ENSMUST00000188993 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28537-201ENSMUST00000189026 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28861-201ENSMUST00000189681 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28717-201ENSMUST00000189950 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29180-201ENSMUST00000190003 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29575-201ENSMUST00000190597 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29631-201ENSMUST00000191065 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm28160-201ENSMUST00000191229 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm29469-201ENSMUST00000191448 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm37658-201ENSMUST00000192672 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm37801-201ENSMUST00000194754 274 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm37129-201ENSMUST00000195791 315 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm25038-201ENSMUST00000082928 130 ntBASIC0.94□□□□□ -2.26
Ccdc3Q9D6Y1 Gm23347-201ENSMUST00000083823 82 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms