Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm24390-201ENSMUST00000179578 62 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm37713-201ENSMUST00000191746 198 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm25820-202ENSMUST00000197479 128 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Gm23625-201ENSMUST00000082457 100 ntBASIC2.06□□□□□ -2.08
Vps28Q9D1C8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm24079-201ENSMUST00000104352 132 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm11834-201ENSMUST00000122257 585 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Trav20-201ENSMUST00000142754 347 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm23232-201ENSMUST00000157300 105 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm26345-201ENSMUST00000157534 120 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm27793-201ENSMUST00000183405 76 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Mir7226-201ENSMUST00000184953 60 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm28408-201ENSMUST00000191557 463 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Mir7661-201ENSMUST00000197023 61 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm44063-201ENSMUST00000203307 376 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm45207-201ENSMUST00000207469 145 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm45456-201ENSMUST00000210841 243 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Vps28Q9D1C8 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm26150-201ENSMUST00000157426 151 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm26435-201ENSMUST00000179026 107 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm5900-201ENSMUST00000179862 375 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm27443-201ENSMUST00000184660 98 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm20144-201ENSMUST00000203031 165 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.04□□□□□ -2.08
Vps28Q9D1C8 Gm9059-201ENSMUST00000118319 183 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm23355-201ENSMUST00000177614 107 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm21885-201ENSMUST00000178891 327 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm23148-201ENSMUST00000180367 107 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm44938-201ENSMUST00000208614 427 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm25258-201ENSMUST00000083049 107 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm23851-201ENSMUST00000083831 103 ntBASIC2.03□□□□□ -2.08
Vps28Q9D1C8 Gm23013-201ENSMUST00000104146 106 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Gm25509-201ENSMUST00000116985 106 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Gm22281-201ENSMUST00000157198 103 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Gm36946-201ENSMUST00000192706 435 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Snord118-201ENSMUST00000082965 135 ntBASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Vps28Q9D1C8 Gm16328-201ENSMUST00000126985 196 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm23469-201ENSMUST00000157131 104 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm22727-201ENSMUST00000158090 116 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm20477-201ENSMUST00000174028 280 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Mir6388-201ENSMUST00000184417 75 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm9156-201ENSMUST00000189660 463 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm37404-201ENSMUST00000195726 359 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm44419-201ENSMUST00000203338 229 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm46997-201ENSMUST00000222108 217 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm25079-201ENSMUST00000082529 203 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm24536-201ENSMUST00000083144 107 ntBASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Vps28Q9D1C8 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Vps28Q9D1C8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm6444-201ENSMUST00000119611 458 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm14678-201ENSMUST00000121396 482 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 n-R5s159-201ENSMUST00000122681 120 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm8121-201ENSMUST00000153583 499 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm22491-201ENSMUST00000157190 102 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Rnu7-201ENSMUST00000158458 62 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm26405-201ENSMUST00000158495 100 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm24818-201ENSMUST00000175093 161 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Snord87-201ENSMUST00000175437 87 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm26864-201ENSMUST00000181346 156 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm28418-201ENSMUST00000186179 423 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm37918-201ENSMUST00000192071 120 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm43035-201ENSMUST00000197626 517 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm44533-201ENSMUST00000207782 268 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 CT025602.1-201ENSMUST00000227281 382 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Gm25789-201ENSMUST00000083294 76 ntBASIC2□□□□□ -2.09
Vps28Q9D1C8 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Mir759-201ENSMUST00000103254 98 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm24984-201ENSMUST00000104454 133 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm22494-201ENSMUST00000104495 128 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm12647-201ENSMUST00000118977 265 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm24851-201ENSMUST00000158028 103 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm24770-201ENSMUST00000158505 92 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm22075-201ENSMUST00000158599 192 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm25491-201ENSMUST00000158733 308 ntBASIC1.99□□□□□ -2.09
Vps28Q9D1C8 Gm17052-201ENSMUST00000165496 289 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms