Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24900-201ENSMUST00000158128 134 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm23474-201ENSMUST00000158884 75 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm25397-201ENSMUST00000176951 92 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm27878-201ENSMUST00000184000 106 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm37377-201ENSMUST00000191733 304 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm23055-201ENSMUST00000082805 94 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Mir340-201ENSMUST00000083483 98 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm22866-201ENSMUST00000083947 177 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ddx28Q9CWT6 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm25115-201ENSMUST00000157187 140 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm23535-201ENSMUST00000157542 106 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm23579-201ENSMUST00000158528 103 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm24837-201ENSMUST00000158683 81 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm22093-201ENSMUST00000158980 111 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm17067-202ENSMUST00000180131 123 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm27793-201ENSMUST00000183405 76 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Mir7068-201ENSMUST00000183439 74 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm29490-201ENSMUST00000190923 342 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm37763-201ENSMUST00000193445 120 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm45005-201ENSMUST00000206640 157 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ddx28Q9CWT6 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm23551-201ENSMUST00000116852 121 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm12417-201ENSMUST00000119153 403 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm11794-201ENSMUST00000119446 237 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm23324-201ENSMUST00000157421 131 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm44477-201ENSMUST00000199661 110 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm20144-201ENSMUST00000203031 165 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm44655-201ENSMUST00000207768 423 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm5899-201ENSMUST00000071770 270 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm22294-201ENSMUST00000083308 104 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Mir93-201ENSMUST00000083593 88 ntBASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.97□□□□□ -2.09
Ddx28Q9CWT6 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
Ddx28Q9CWT6 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Ddx28Q9CWT6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm23941-201ENSMUST00000101953 107 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm26342-201ENSMUST00000104557 129 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm13714-201ENSMUST00000117313 221 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm24818-201ENSMUST00000175093 161 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm25253-201ENSMUST00000179958 107 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm42672-201ENSMUST00000197821 352 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm42594-201ENSMUST00000199511 246 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm7214-201ENSMUST00000222428 272 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm26447-201ENSMUST00000082448 129 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm24625-201ENSMUST00000082622 130 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm23970-201ENSMUST00000083319 107 ntBASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Ddx28Q9CWT6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm13967-201ENSMUST00000120404 380 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm11606-201ENSMUST00000120706 617 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm15536-201ENSMUST00000121411 114 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm24783-201ENSMUST00000157639 100 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Mir1936-201ENSMUST00000158699 93 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm25642-201ENSMUST00000175137 66 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm20923-201ENSMUST00000190009 319 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm21088-201ENSMUST00000190875 316 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm24355-201ENSMUST00000082858 122 ntBASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.95□□□□□ -2.1
Ddx28Q9CWT6 Mir374b-201ENSMUST00000102314 95 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Gm22221-201ENSMUST00000157362 103 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Gm26157-201ENSMUST00000158974 126 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Gm16584-201ENSMUST00000159267 189 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Mir5118-201ENSMUST00000175551 67 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Mir376a-201ENSMUST00000197584 68 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Gm23679-201ENSMUST00000083161 119 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Gm26107-201ENSMUST00000083972 107 ntBASIC1.94□□□□□ -2.1
Ddx28Q9CWT6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm23015-201ENSMUST00000104145 128 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm15213-201ENSMUST00000122098 216 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm23983-201ENSMUST00000157142 114 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm25113-201ENSMUST00000157185 143 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm22338-201ENSMUST00000157715 129 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm22731-201ENSMUST00000158086 94 ntBASIC1.93□□□□□ -2.1
Ddx28Q9CWT6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms