Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm25982-201ENSMUST00000157920 101 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm25831-201ENSMUST00000158924 163 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Mir6346-201ENSMUST00000183982 81 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Mir1291-201ENSMUST00000199842 117 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm44811-201ENSMUST00000209120 228 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm24406-201ENSMUST00000083026 128 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Gm22364-201ENSMUST00000083097 98 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Snora34-201ENSMUST00000083402 138 ntBASIC1.78□□□□□ -2.12
Smc1aQ9CU62 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
Smc1aQ9CU62 Gm25543-201ENSMUST00000122678 312 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm29397-201ENSMUST00000185205 333 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm29107-201ENSMUST00000190910 347 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm18433-201ENSMUST00000192747 197 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm5023-201ENSMUST00000217442 587 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.77□□□□□ -2.13
Smc1aQ9CU62 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm23731-201ENSMUST00000083749 107 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.77□□□□□ -2.13
Smc1aQ9CU62 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm14574-201ENSMUST00000120644 279 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm24851-201ENSMUST00000158028 103 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Mir3057-201ENSMUST00000175040 91 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm37399-201ENSMUST00000195224 416 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm43238-201ENSMUST00000196463 359 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm43578-201ENSMUST00000201250 459 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm44429-201ENSMUST00000203542 186 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm25578-201ENSMUST00000083406 104 ntBASIC1.76□□□□□ -2.13
Smc1aQ9CU62 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm25541-201ENSMUST00000116888 126 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm11854-201ENSMUST00000117839 446 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm11798-201ENSMUST00000119150 421 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm15861-201ENSMUST00000120979 339 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm14972-201ENSMUST00000121780 364 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm16038-201ENSMUST00000159317 193 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm20462-201ENSMUST00000172623 408 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm22510-201ENSMUST00000179304 79 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm26336-201ENSMUST00000179449 79 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm26390-201ENSMUST00000179628 79 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm25936-201ENSMUST00000179952 114 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm27326-201ENSMUST00000183504 95 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm27265-201ENSMUST00000183559 77 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm28848-201ENSMUST00000189984 168 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm19123-201ENSMUST00000190716 651 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm43976-201ENSMUST00000203637 235 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm44687-201ENSMUST00000204975 235 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm45365-201ENSMUST00000209489 256 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Snord68-201ENSMUST00000082516 86 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm23404-201ENSMUST00000082543 97 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm23041-201ENSMUST00000083868 106 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.75□□□□□ -2.13
Smc1aQ9CU62 Gm26249-201ENSMUST00000116708 118 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm11420-201ENSMUST00000120047 402 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm22315-201ENSMUST00000158010 143 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm25434-201ENSMUST00000158278 167 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm22113-201ENSMUST00000158343 104 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm26159-201ENSMUST00000158968 104 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm27410-201ENSMUST00000183851 115 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm28383-201ENSMUST00000187563 139 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm29262-201ENSMUST00000190084 196 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm9251-201ENSMUST00000197202 628 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Smc1aQ9CU62 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms