Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm23627-201ENSMUST00000082459 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm22502-201ENSMUST00000082488 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm22977-201ENSMUST00000082615 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm24149-201ENSMUST00000082757 107 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Snord14a-201ENSMUST00000082807 87 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm26164-201ENSMUST00000083793 104 ntBASIC1.69□□□□□ -2.14
Ccdc43Q9CR29 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Gm24394-201ENSMUST00000158141 123 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Gm23208-201ENSMUST00000158666 127 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Gm24510-201ENSMUST00000174965 94 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Gm28257-201ENSMUST00000185244 463 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ccdc43Q9CR29 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm14296-202ENSMUST00000108931 750 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm11835-201ENSMUST00000120635 663 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm24799-201ENSMUST00000178431 79 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm45365-201ENSMUST00000209489 256 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm18617-201ENSMUST00000222311 259 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm16976-205ENSMUST00000227324 226 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm10092-201ENSMUST00000077110 180 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 Gm24625-201ENSMUST00000082622 130 ntBASIC1.67□□□□□ -2.14
Ccdc43Q9CR29 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm20462-201ENSMUST00000172623 408 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm37579-201ENSMUST00000194291 142 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm44465-201ENSMUST00000199536 114 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm25357-201ENSMUST00000082745 72 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.66□□□□□ -2.14
Ccdc43Q9CR29 Gm26500-201ENSMUST00000101867 106 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm23010-201ENSMUST00000104151 126 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm24895-201ENSMUST00000122742 74 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm23558-201ENSMUST00000157823 80 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm22099-201ENSMUST00000157925 123 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm23660-201ENSMUST00000178362 79 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Gm24088-201ENSMUST00000179100 79 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.65□□□□□ -2.15
Ccdc43Q9CR29 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm23951-201ENSMUST00000104029 132 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm13396-201ENSMUST00000120617 271 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm14775-201ENSMUST00000122089 310 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm23048-201ENSMUST00000157237 129 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm24618-201ENSMUST00000177718 94 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm23953-201ENSMUST00000178214 94 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm26332-201ENSMUST00000179813 94 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm22863-201ENSMUST00000180265 94 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm29613-201ENSMUST00000185846 313 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm29544-201ENSMUST00000188860 313 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Gm28808-201ENSMUST00000190978 313 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.64□□□□□ -2.15
Ccdc43Q9CR29 Mir1b-201ENSMUST00000117012 122 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm22281-201ENSMUST00000157198 103 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm22963-201ENSMUST00000157960 91 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm27793-201ENSMUST00000183405 76 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm28414-201ENSMUST00000190111 294 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm37693-201ENSMUST00000194562 234 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Gm5010-201ENSMUST00000213131 260 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Mir320-201ENSMUST00000083594 82 ntBASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Ccdc43Q9CR29 Mir293-201ENSMUST00000104841 80 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm24366-201ENSMUST00000175383 86 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm27271-201ENSMUST00000183509 170 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28110-201ENSMUST00000185782 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29057-201ENSMUST00000186468 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29661-201ENSMUST00000186781 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28737-201ENSMUST00000186808 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29147-201ENSMUST00000186846 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29118-201ENSMUST00000186908 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28433-201ENSMUST00000187085 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm29227-201ENSMUST00000187139 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28759-201ENSMUST00000187621 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28831-201ENSMUST00000187739 315 ntBASIC1.62□□□□□ -2.15
Ccdc43Q9CR29 Gm28200-201ENSMUST00000187778 315 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms