Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm22977-201ENSMUST00000082615 107 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm24149-201ENSMUST00000082757 107 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Gm24037-201ENSMUST00000082871 180 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Mir193a-201ENSMUST00000083461 66 ntBASIC0.98□□□□□ -2.25
RTRAFQ9CQE8 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Gm25068-201ENSMUST00000103895 110 ntBASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Gm22485-201ENSMUST00000157990 109 ntBASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Gm28257-201ENSMUST00000185244 463 ntBASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC0.97□□□□□ -2.25
RTRAFQ9CQE8 Gm26339-201ENSMUST00000102368 99 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Mir758-201ENSMUST00000103260 81 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Mir1b-201ENSMUST00000117012 122 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm15214-201ENSMUST00000122155 470 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm23390-201ENSMUST00000157393 106 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm24777-201ENSMUST00000157644 107 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm16584-201ENSMUST00000159267 189 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm16399-201ENSMUST00000181423 219 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm29167-201ENSMUST00000190024 377 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm23614-201ENSMUST00000082598 107 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Gm22723-201ENSMUST00000083820 129 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.96□□□□□ -2.26
RTRAFQ9CQE8 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm11254-201ENSMUST00000122368 653 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm26049-201ENSMUST00000157313 108 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm25836-201ENSMUST00000158918 123 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm2962-201ENSMUST00000159266 336 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm24510-201ENSMUST00000174965 94 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm24487-201ENSMUST00000178017 63 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm25253-201ENSMUST00000179958 107 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm27271-201ENSMUST00000183509 170 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm43723-201ENSMUST00000196886 189 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 AC134860.6-201ENSMUST00000226038 285 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Snord14a-201ENSMUST00000082807 87 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm22685-201ENSMUST00000082848 106 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RTRAFQ9CQE8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Mir544-201ENSMUST00000103813 78 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm13396-201ENSMUST00000120617 271 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm22435-201ENSMUST00000158552 128 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm23022-201ENSMUST00000158768 180 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Mir6346-201ENSMUST00000183982 81 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Mir7081-201ENSMUST00000184490 75 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm10092-201ENSMUST00000077110 180 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm25409-201ENSMUST00000083764 131 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Gm3867-201ENSMUST00000086108 279 ntBASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RTRAFQ9CQE8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Mir669d-201ENSMUST00000104644 121 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm12433-201ENSMUST00000119659 255 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm22281-201ENSMUST00000157198 103 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm22164-201ENSMUST00000158413 106 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm28409-201ENSMUST00000187064 103 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm43199-201ENSMUST00000200019 307 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm44960-201ENSMUST00000207403 141 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm44811-201ENSMUST00000209120 228 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm45268-201ENSMUST00000210046 370 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm45704-201ENSMUST00000212582 403 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 Gm23041-201ENSMUST00000083868 106 ntBASIC0.93□□□□□ -2.26
RTRAFQ9CQE8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm24431-201ENSMUST00000104073 66 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm26474-201ENSMUST00000116762 122 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm14782-201ENSMUST00000120151 195 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm13729-201ENSMUST00000120328 406 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm25909-201ENSMUST00000157619 121 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm24853-201ENSMUST00000158026 121 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm22129-201ENSMUST00000179034 107 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm23191-201ENSMUST00000179147 107 ntBASIC0.92□□□□□ -2.26
RTRAFQ9CQE8 Gm27793-201ENSMUST00000183405 76 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms