Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm26089-201ENSMUST00000157898 107 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm22929-201ENSMUST00000175517 107 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Mir8119-201ENSMUST00000183371 129 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm20118-201ENSMUST00000187207 162 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm19123-201ENSMUST00000190716 651 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm5034-201ENSMUST00000199115 634 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm19855-201ENSMUST00000210145 249 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.03□□□□□ -2.24
Use1Q9CQ56 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Snora41-201ENSMUST00000082668 132 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm23448-201ENSMUST00000083151 104 ntBASIC1.03□□□□□ -2.24
Use1Q9CQ56 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm26080-201ENSMUST00000104069 131 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm12255-201ENSMUST00000117184 284 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm24076-201ENSMUST00000158179 94 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm24577-201ENSMUST00000158580 63 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm38395-201ENSMUST00000199904 830 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Snord68-201ENSMUST00000082516 86 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm25128-201ENSMUST00000083339 76 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Gm23731-201ENSMUST00000083749 107 ntBASIC1.02□□□□□ -2.25
Use1Q9CQ56 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Use1Q9CQ56 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm14803-201ENSMUST00000117163 361 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Use1Q9CQ56 Mir6381-201ENSMUST00000183426 87 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm27817-201ENSMUST00000184302 233 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm29167-201ENSMUST00000190024 377 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm9251-201ENSMUST00000197202 628 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm24625-201ENSMUST00000082622 130 ntBASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Use1Q9CQ56 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1□□□□□ -2.25
Use1Q9CQ56 Gm14766-201ENSMUST00000121689 367 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Mir3061-201ENSMUST00000175129 91 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Gm44282-201ENSMUST00000203199 190 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Gm45268-201ENSMUST00000210046 370 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Use1Q9CQ56 Gm12080-201ENSMUST00000119821 1883 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Gm14917-201ENSMUST00000118872 2105 ntBASIC1□□□□□ -2.25
Use1Q9CQ56 Gm25507-201ENSMUST00000116981 144 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm24808-201ENSMUST00000157993 118 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm26029-201ENSMUST00000158659 132 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm18588-201ENSMUST00000177308 492 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm27419-201ENSMUST00000184576 109 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm45815-201ENSMUST00000220241 146 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.99□□□□□ -2.25
Use1Q9CQ56 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Use1Q9CQ56 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm22233-201ENSMUST00000157464 114 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm25868-201ENSMUST00000158253 114 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm24005-201ENSMUST00000158459 296 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm22425-201ENSMUST00000158532 138 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Mir3098-201ENSMUST00000175416 87 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm18696-201ENSMUST00000220103 274 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm26224-201ENSMUST00000082506 80 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Gm25207-201ENSMUST00000093745 107 ntBASIC0.98□□□□□ -2.25
Use1Q9CQ56 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Use1Q9CQ56 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Use1Q9CQ56 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Use1Q9CQ56 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm24431-201ENSMUST00000104073 66 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm22780-201ENSMUST00000104084 132 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm23836-201ENSMUST00000104434 129 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Mir872-201ENSMUST00000104728 81 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm15162-201ENSMUST00000119325 283 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm11254-201ENSMUST00000122368 653 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm22551-201ENSMUST00000157795 103 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm28506-201ENSMUST00000189937 150 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm28414-201ENSMUST00000190111 294 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm5001-201ENSMUST00000204361 331 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm45403-201ENSMUST00000209453 276 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.97□□□□□ -2.25
Use1Q9CQ56 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
Use1Q9CQ56 Gm22935-201ENSMUST00000103960 104 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm22281-201ENSMUST00000157198 103 ntBASIC0.96□□□□□ -2.26
Use1Q9CQ56 Gm24221-201ENSMUST00000158833 313 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms