Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm23191-201ENSMUST00000179147 107 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm26265-202ENSMUST00000196326 133 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm44465-201ENSMUST00000199536 114 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm45456-201ENSMUST00000210841 243 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Gm5899-201ENSMUST00000071770 270 ntBASIC1.5□□□□□ -2.17
Sf3b1Q99NB9 Mir872-201ENSMUST00000104728 81 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm14803-201ENSMUST00000117163 361 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm11254-201ENSMUST00000122368 653 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm45704-201ENSMUST00000212582 403 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm23614-201ENSMUST00000082598 107 ntBASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Sf3b1Q99NB9 Gm11862-201ENSMUST00000119678 659 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm22027-201ENSMUST00000122737 127 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm6956-201ENSMUST00000134724 546 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm23535-201ENSMUST00000157542 106 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm22113-201ENSMUST00000158343 104 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm26435-201ENSMUST00000179026 107 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Mir6346-201ENSMUST00000183982 81 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm29397-201ENSMUST00000185205 333 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm29167-201ENSMUST00000190024 377 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Gm23041-201ENSMUST00000083868 106 ntBASIC1.48□□□□□ -2.17
Sf3b1Q99NB9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm11606-201ENSMUST00000120706 617 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm22435-201ENSMUST00000158552 128 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm26200-201ENSMUST00000180273 79 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm28995-201ENSMUST00000186625 261 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm38395-201ENSMUST00000199904 830 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm43993-201ENSMUST00000203972 247 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm33654-201ENSMUST00000221704 215 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm21937-201ENSMUST00000222825 218 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm23627-201ENSMUST00000082459 107 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm22502-201ENSMUST00000082488 107 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm22977-201ENSMUST00000082615 107 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm24149-201ENSMUST00000082757 107 ntBASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Sf3b1Q99NB9 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm24308-201ENSMUST00000177773 114 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm26180-201ENSMUST00000179942 107 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm28912-201ENSMUST00000189001 234 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm36953-201ENSMUST00000195295 268 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Gm44491-201ENSMUST00000196794 96 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Snora3-201ENSMUST00000083082 132 ntBASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sf3b1Q99NB9 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm25773-201ENSMUST00000116718 127 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm14937-201ENSMUST00000119709 208 ntBASIC1.45□□□□□ -2.18
Sf3b1Q99NB9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms