Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC-0.02□□□□□ -2.41
Cspg4Q8VHY0 CT010506.2-201ENSMUST00000225618 183 ntBASIC-0.02□□□□□ -2.41
Cspg4Q8VHY0 Gm23452-201ENSMUST00000083327 107 ntBASIC-0.02□□□□□ -2.41
Cspg4Q8VHY0 Gm11792-201ENSMUST00000120640 168 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm24839-201ENSMUST00000122602 107 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm23586-201ENSMUST00000157657 123 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm5899-201ENSMUST00000071770 270 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Snord85-201ENSMUST00000083262 73 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm23650-201ENSMUST00000083355 70 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Mir3061-201ENSMUST00000175129 91 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm38395-201ENSMUST00000199904 830 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm25794-201ENSMUST00000083286 107 ntBASIC-0.03□□□□□ -2.41
Cspg4Q8VHY0 Mir374b-201ENSMUST00000102314 95 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm43583-201ENSMUST00000199235 303 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm43914-201ENSMUST00000203592 594 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC158606.1-201ENSMUST00000220078 325 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm20438-201ENSMUST00000174441 329 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC101677.1-201ENSMUST00000218590 158 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 AC154692.1-201ENSMUST00000228314 544 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC-0.04□□□□□ -2.42
Cspg4Q8VHY0 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm25012-201ENSMUST00000158396 164 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm15529-201ENSMUST00000121833 994 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm27861-201ENSMUST00000183920 214 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm22972-201ENSMUST00000083297 131 ntBASIC-0.05□□□□□ -2.42
Cspg4Q8VHY0 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm23691-201ENSMUST00000101878 107 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm23858-201ENSMUST00000158384 106 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Mir3473a-201ENSMUST00000175011 78 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm43529-201ENSMUST00000199178 412 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm20102-201ENSMUST00000222445 220 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 AC123656.2-201ENSMUST00000226726 227 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Mir411-201ENSMUST00000083543 82 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Mir421-201ENSMUST00000083575 76 ntBASIC-0.06□□□□□ -2.42
Cspg4Q8VHY0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm24390-201ENSMUST00000179578 62 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm18667-201ENSMUST00000186523 484 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Mir468-201ENSMUST00000197332 78 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm14269-201ENSMUST00000120455 306 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm15177-201ENSMUST00000120491 577 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm11849-201ENSMUST00000121293 261 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm23390-201ENSMUST00000157393 106 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm24388-201ENSMUST00000177872 107 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 AC156560.1-201ENSMUST00000221425 256 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC-0.07□□□□□ -2.42
Cspg4Q8VHY0 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm13603-201ENSMUST00000119404 83 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm26150-201ENSMUST00000157426 151 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm24536-201ENSMUST00000083144 107 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm37642-201ENSMUST00000193166 1735 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm43924-201ENSMUST00000204851 1736 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.08□□□□□ -2.42
Cspg4Q8VHY0 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms