Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm44976-201ENSMUST00000205543 261 ntBASIC0.35□□□□□ -2.35
Nup35Q8R4R6 Gm44830-201ENSMUST00000207667 584 ntBASIC0.35□□□□□ -2.35
Nup35Q8R4R6 Gm24038-201ENSMUST00000082872 159 ntBASIC0.35□□□□□ -2.35
Nup35Q8R4R6 Gm25896-201ENSMUST00000083713 136 ntBASIC0.35□□□□□ -2.35
Nup35Q8R4R6 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Nup35Q8R4R6 Gm13804-201ENSMUST00000119552 172 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Mir15a-201ENSMUST00000175266 84 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Gm28439-201ENSMUST00000187714 876 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Gm42719-201ENSMUST00000197393 355 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Gm43993-201ENSMUST00000203972 247 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 AC138667.2-201ENSMUST00000224880 598 ntBASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Nup35Q8R4R6 Gm23130-201ENSMUST00000104252 74 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm13475-201ENSMUST00000119290 234 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm11862-201ENSMUST00000119678 659 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm22796-201ENSMUST00000157234 106 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm26484-201ENSMUST00000158018 106 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Gm24152-201ENSMUST00000082764 163 ntBASIC0.33□□□□□ -2.36
Nup35Q8R4R6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm25378-201ENSMUST00000104333 129 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm25884-201ENSMUST00000157782 62 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Mir1936-201ENSMUST00000158699 93 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm24678-201ENSMUST00000158756 104 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Mir6540-201ENSMUST00000184886 108 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm26265-202ENSMUST00000196326 133 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm25820-201ENSMUST00000198589 127 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.32□□□□□ -2.36
Nup35Q8R4R6 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.32□□□□□ -2.36
Nup35Q8R4R6 Gm26377-201ENSMUST00000102184 108 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm14980-201ENSMUST00000121247 736 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm23981-201ENSMUST00000157136 106 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm24910-201ENSMUST00000157289 272 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm25054-201ENSMUST00000157370 97 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm26358-201ENSMUST00000158215 97 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm23340-201ENSMUST00000158955 123 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm23725-201ENSMUST00000177876 107 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm25312-201ENSMUST00000178972 107 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Nup35Q8R4R6 AC116465.1-201ENSMUST00000220324 235 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 AC116589.7-201ENSMUST00000221061 239 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 AC164117.1-201ENSMUST00000221726 239 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Gm11351-202ENSMUST00000225724 478 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.31□□□□□ -2.36
Nup35Q8R4R6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22935-201ENSMUST00000103960 104 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24596-201ENSMUST00000122504 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24584-201ENSMUST00000157972 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22328-201ENSMUST00000158074 112 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm27510-201ENSMUST00000158214 64 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24726-201ENSMUST00000158232 121 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22163-201ENSMUST00000158408 135 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25901-201ENSMUST00000158494 130 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25211-201ENSMUST00000177553 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24540-201ENSMUST00000177627 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25256-201ENSMUST00000177746 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22822-201ENSMUST00000177941 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Rnu6-201ENSMUST00000178023 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm23151-201ENSMUST00000178061 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25245-201ENSMUST00000178139 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24753-201ENSMUST00000178183 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25829-201ENSMUST00000178275 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22092-201ENSMUST00000178290 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24486-201ENSMUST00000178420 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm23217-201ENSMUST00000178482 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm26245-201ENSMUST00000178491 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm23610-201ENSMUST00000178659 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm23092-201ENSMUST00000178688 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25709-201ENSMUST00000178844 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25547-201ENSMUST00000178877 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24722-201ENSMUST00000179017 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22969-201ENSMUST00000179018 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25101-201ENSMUST00000179057 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm26378-201ENSMUST00000179093 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm24873-201ENSMUST00000179101 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm23934-201ENSMUST00000179111 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm22623-201ENSMUST00000179244 107 ntBASIC0.3□□□□□ -2.36
Nup35Q8R4R6 Gm25737-201ENSMUST00000179274 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms