Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm23101-201ENSMUST00000157550 137 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Mir5123-201ENSMUST00000177794 83 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm25933-201ENSMUST00000178943 108 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm27698-201ENSMUST00000184060 249 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Mir7062-201ENSMUST00000185038 66 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm43676-201ENSMUST00000197532 540 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Gm44182-201ENSMUST00000204052 115 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.75□□□□□ -1.97
Clrn1Q8K445 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm15861-201ENSMUST00000120979 339 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Mir1951-201ENSMUST00000157981 89 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm22483-201ENSMUST00000157986 274 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm25716-201ENSMUST00000158628 104 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm6003-201ENSMUST00000187903 463 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Clrn1Q8K445 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm9370-201ENSMUST00000222787 609 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm10025-201ENSMUST00000079568 372 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Clrn1Q8K445 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.74□□□□□ -1.97
Clrn1Q8K445 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Clrn1Q8K445 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Clrn1Q8K445 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Clrn1Q8K445 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm22051-201ENSMUST00000117002 127 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm6954-201ENSMUST00000117416 225 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm12513-201ENSMUST00000118617 352 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm13801-201ENSMUST00000120750 160 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm14775-201ENSMUST00000122089 310 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm25888-201ENSMUST00000157778 302 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm22553-201ENSMUST00000157797 295 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm25071-201ENSMUST00000175232 70 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm27700-201ENSMUST00000185003 81 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm43199-201ENSMUST00000200019 307 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm25142-201ENSMUST00000082698 107 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm26126-201ENSMUST00000083188 164 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Clrn1Q8K445 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Clrn1Q8K445 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.73□□□□□ -1.97
Clrn1Q8K445 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm12449-201ENSMUST00000117572 234 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm12412-201ENSMUST00000121867 328 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm14491-201ENSMUST00000121919 199 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm23325-201ENSMUST00000157422 129 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm17117-201ENSMUST00000163665 299 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm23966-201ENSMUST00000179823 107 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Mir6993-201ENSMUST00000184912 65 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm6060-201ENSMUST00000188671 251 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm44859-201ENSMUST00000207831 94 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Gm44564-201ENSMUST00000207985 180 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Clrn1Q8K445 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.72□□□□□ -1.97
Clrn1Q8K445 Mir693-201ENSMUST00000102187 89 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Mir499-201ENSMUST00000102357 79 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm22322-201ENSMUST00000157151 111 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm23381-201ENSMUST00000157676 94 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm22381-201ENSMUST00000158186 107 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm25490-201ENSMUST00000158734 130 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Clrn1Q8K445 Mir28b-201ENSMUST00000175399 80 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm24573-201ENSMUST00000175499 112 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm16404-201ENSMUST00000177739 468 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm26097-201ENSMUST00000179642 93 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm14598-201ENSMUST00000180109 468 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm14625-201ENSMUST00000180231 468 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.71□□□□□ -1.98
Clrn1Q8K445 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm44922-201ENSMUST00000206690 90 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Clrn1Q8K445 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.71□□□□□ -1.98
Clrn1Q8K445 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm13885-201ENSMUST00000117569 187 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm24911-201ENSMUST00000157292 136 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm23324-201ENSMUST00000157421 131 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm24676-201ENSMUST00000158758 75 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm22476-201ENSMUST00000158902 100 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Clrn1Q8K445 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Clrn1Q8K445 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.7□□□□□ -1.98
Clrn1Q8K445 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms