Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24901-201ENSMUST00000158125 110 ntBASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23448-201ENSMUST00000083151 104 ntBASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Ccdc28aQ8CEI3 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm22834-201ENSMUST00000102021 79 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm22750-201ENSMUST00000102076 103 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm12255-201ENSMUST00000117184 284 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm14923-201ENSMUST00000118270 155 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm11358-201ENSMUST00000122310 373 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm23535-201ENSMUST00000157542 106 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24808-201ENSMUST00000157993 118 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm24668-201ENSMUST00000158935 104 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29640-201ENSMUST00000187972 278 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm44491-201ENSMUST00000196794 96 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm44320-201ENSMUST00000199276 86 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm44830-201ENSMUST00000207667 584 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm45815-201ENSMUST00000220241 146 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.79□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25938-201ENSMUST00000104139 166 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm22771-201ENSMUST00000104449 91 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm6829-201ENSMUST00000119858 360 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25102-201ENSMUST00000122479 112 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm27957-201ENSMUST00000184054 127 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28110-201ENSMUST00000185782 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29057-201ENSMUST00000186468 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28737-201ENSMUST00000186808 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29147-201ENSMUST00000186846 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29118-201ENSMUST00000186908 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28433-201ENSMUST00000187085 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29227-201ENSMUST00000187139 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28759-201ENSMUST00000187621 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28831-201ENSMUST00000187739 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28200-201ENSMUST00000187778 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29034-201ENSMUST00000188099 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28752-201ENSMUST00000188340 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29378-201ENSMUST00000188723 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28569-201ENSMUST00000188748 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28120-201ENSMUST00000188812 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28369-201ENSMUST00000188993 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28537-201ENSMUST00000189026 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28909-201ENSMUST00000189406 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28861-201ENSMUST00000189681 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28717-201ENSMUST00000189950 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29180-201ENSMUST00000190003 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29575-201ENSMUST00000190597 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29631-201ENSMUST00000191065 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm28160-201ENSMUST00000191229 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm29469-201ENSMUST00000191448 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm37129-201ENSMUST00000195791 315 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm26265-202ENSMUST00000196326 133 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm5899-201ENSMUST00000071770 270 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm25651-201ENSMUST00000083782 119 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.78□□□□□ -2.28
Ccdc28aQ8CEI3 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.78□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23011-201ENSMUST00000104148 132 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23390-201ENSMUST00000157393 106 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm24577-201ENSMUST00000158580 63 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm17100-201ENSMUST00000168963 272 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm18588-201ENSMUST00000177308 492 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm18185-201ENSMUST00000186725 667 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm43993-201ENSMUST00000203972 247 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23515-201ENSMUST00000082829 107 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm26314-201ENSMUST00000083891 107 ntBASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Ccdc28aQ8CEI3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm9059-201ENSMUST00000118319 183 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm13475-201ENSMUST00000119290 234 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm23557-201ENSMUST00000157820 138 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27271-201ENSMUST00000183509 170 ntBASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.76□□□□□ -2.29
Ccdc28aQ8CEI3 Gm9251-201ENSMUST00000197202 628 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms