Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm12897-201ENSMUST00000120341 250 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm14709-201ENSMUST00000121225 304 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm14845-201ENSMUST00000121259 306 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm14770-201ENSMUST00000122197 312 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm22984-201ENSMUST00000122751 122 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25392-201ENSMUST00000157335 297 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm24010-201ENSMUST00000157731 282 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25748-201ENSMUST00000175487 70 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25020-201ENSMUST00000178071 107 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Mir376a-201ENSMUST00000197584 68 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm2829-201ENSMUST00000213121 499 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm26265-201ENSMUST00000083277 135 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Gm23040-201ENSMUST00000083869 163 ntBASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc28bQ8CEG5 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm24122-201ENSMUST00000104107 132 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm24403-201ENSMUST00000104616 130 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm22713-201ENSMUST00000116895 130 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Mir1b-201ENSMUST00000117012 122 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25808-201ENSMUST00000122784 284 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm24691-201ENSMUST00000157762 140 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25488-201ENSMUST00000158728 118 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Mir3076-201ENSMUST00000175415 60 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm22118-201ENSMUST00000175593 171 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm23141-201ENSMUST00000178682 94 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm25457-201ENSMUST00000179509 107 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm27271-201ENSMUST00000183509 170 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Mir6399-201ENSMUST00000184050 84 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm29167-201ENSMUST00000190024 377 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Mir465d-201ENSMUST00000196314 58 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm44024-201ENSMUST00000203008 476 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm18991-201ENSMUST00000209225 746 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm5899-201ENSMUST00000071770 270 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc28bQ8CEG5 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm25943-201ENSMUST00000103791 90 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24116-201ENSMUST00000103975 107 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22027-201ENSMUST00000122737 127 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22727-201ENSMUST00000158090 116 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm7592-201ENSMUST00000160674 627 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24304-201ENSMUST00000177635 107 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm25285-201ENSMUST00000178951 90 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27402-201ENSMUST00000183890 120 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27544-201ENSMUST00000185069 155 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm28921-201ENSMUST00000190219 378 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm7214-201ENSMUST00000222428 272 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22299-201ENSMUST00000082663 136 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm23246-201ENSMUST00000083371 67 ntBASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc28bQ8CEG5 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Mir3096-201ENSMUST00000116685 71 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm26249-201ENSMUST00000116708 118 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22678-201ENSMUST00000116974 101 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm14215-201ENSMUST00000120578 221 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm15365-201ENSMUST00000122392 300 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm15692-201ENSMUST00000152173 352 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22315-201ENSMUST00000158010 143 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm26426-201ENSMUST00000177866 123 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm21827-201ENSMUST00000178247 423 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm26060-201ENSMUST00000180094 123 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27761-201ENSMUST00000184091 131 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27369-201ENSMUST00000185182 71 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm28900-201ENSMUST00000185232 156 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm29140-201ENSMUST00000190187 476 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm37089-201ENSMUST00000195616 129 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Gm9795-201ENSMUST00000062156 693 ntBASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc28bQ8CEG5 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22215-201ENSMUST00000157558 96 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm27579-201ENSMUST00000158113 63 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm24075-201ENSMUST00000158175 72 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Snord11-201ENSMUST00000158468 84 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm22800-201ENSMUST00000175627 94 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Snora15-201ENSMUST00000177461 131 ntBASIC1.94□□□□□ -2.1
Ccdc28bQ8CEG5 Gm37586-201ENSMUST00000193654 204 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms