Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm23953-201ENSMUST00000178214 94 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm26332-201ENSMUST00000179813 94 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm22863-201ENSMUST00000180265 94 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Mir6352-201ENSMUST00000184495 116 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Gm37338-201ENSMUST00000191986 127 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Mir7021-201ENSMUST00000197026 63 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.14□□□□□ -2.07
Nup88Q8CEC0 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm11935-201ENSMUST00000118608 399 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm23779-201ENSMUST00000157938 64 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm22731-201ENSMUST00000158086 94 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm23024-201ENSMUST00000158770 292 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm23921-201ENSMUST00000175258 107 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm25253-201ENSMUST00000179958 107 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Mir7678-201ENSMUST00000185076 71 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm19901-201ENSMUST00000192191 495 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm44419-201ENSMUST00000203338 229 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Gm25402-201ENSMUST00000082966 131 ntBASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Nup88Q8CEC0 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm20438-201ENSMUST00000174441 329 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm28288-201ENSMUST00000191019 214 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Mir7661-201ENSMUST00000197023 61 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm25820-201ENSMUST00000198589 127 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm43993-201ENSMUST00000203972 247 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm45207-201ENSMUST00000207469 145 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm24412-201ENSMUST00000083426 109 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Gm26329-201ENSMUST00000093723 110 ntBASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Nup88Q8CEC0 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm24275-201ENSMUST00000116780 146 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm15215-201ENSMUST00000117773 489 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm12417-201ENSMUST00000119153 403 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm11834-201ENSMUST00000122257 585 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm25805-201ENSMUST00000122788 108 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm23535-201ENSMUST00000157542 106 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm24076-201ENSMUST00000158179 94 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm17067-202ENSMUST00000180131 123 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm25284-201ENSMUST00000180345 141 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Mir6379-201ENSMUST00000183392 115 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Mir6995-201ENSMUST00000183658 71 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm27722-201ENSMUST00000183908 76 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm37778-201ENSMUST00000191732 190 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm26265-202ENSMUST00000196326 133 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Mir3961-201ENSMUST00000198795 59 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm25079-201ENSMUST00000082529 203 ntBASIC2.11□□□□□ -2.07
Nup88Q8CEC0 Gm15281-201ENSMUST00000125181 351 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm22221-201ENSMUST00000157362 103 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm24638-201ENSMUST00000179807 132 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm22263-201ENSMUST00000180060 104 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm26200-201ENSMUST00000180273 79 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm37404-201ENSMUST00000195726 359 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Mir3087-201ENSMUST00000199405 56 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm44063-201ENSMUST00000203307 376 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.1□□□□□ -2.07
Nup88Q8CEC0 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gm24977-201ENSMUST00000083106 163 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.1□□□□□ -2.07
Nup88Q8CEC0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm14782-201ENSMUST00000120151 195 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm25113-201ENSMUST00000157185 143 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm22556-201ENSMUST00000157803 100 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm28408-201ENSMUST00000191557 463 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm18546-201ENSMUST00000197245 676 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Snord43-201ENSMUST00000199549 108 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm44655-201ENSMUST00000207768 423 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm24356-201ENSMUST00000082859 106 ntBASIC2.09□□□□□ -2.07
Nup88Q8CEC0 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.09□□□□□ -2.08
Nup88Q8CEC0 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Nup88Q8CEC0 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm15526-201ENSMUST00000112504 204 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm11862-201ENSMUST00000119678 659 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm22338-201ENSMUST00000157715 129 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm24333-201ENSMUST00000175101 84 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm22299-201ENSMUST00000082663 136 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Gm23412-201ENSMUST00000083017 107 ntBASIC2.08□□□□□ -2.08
Nup88Q8CEC0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm15162-201ENSMUST00000119325 283 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm13992-201ENSMUST00000120558 156 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.07□□□□□ -2.08
Nup88Q8CEC0 Gm22598-201ENSMUST00000157600 127 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms