Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.72□□□□□ -2.13
Ccdc38Q8CDN8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
Ccdc38Q8CDN8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm11798-201ENSMUST00000119150 421 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm15115-201ENSMUST00000121145 264 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm6025-201ENSMUST00000121517 201 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm25333-201ENSMUST00000158035 246 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm24394-201ENSMUST00000158141 123 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm20462-201ENSMUST00000172623 408 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm22263-201ENSMUST00000180060 104 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm44654-201ENSMUST00000208052 329 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm45654-201ENSMUST00000210980 123 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm23041-201ENSMUST00000083868 106 ntBASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ccdc38Q8CDN8 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm14972-201ENSMUST00000121780 364 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm24851-201ENSMUST00000158028 103 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm23854-201ENSMUST00000158378 108 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm26405-201ENSMUST00000158495 100 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Mir1936-201ENSMUST00000158699 93 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm25253-201ENSMUST00000179958 107 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm27711-201ENSMUST00000183802 118 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Mir7017-201ENSMUST00000184894 62 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm25929-201ENSMUST00000082784 107 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm25930-201ENSMUST00000082785 107 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm24977-201ENSMUST00000083106 163 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm22972-201ENSMUST00000083297 131 ntBASIC1.7□□□□□ -2.14
Ccdc38Q8CDN8 Gm22750-201ENSMUST00000102076 103 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm11859-201ENSMUST00000118099 455 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm28925-201ENSMUST00000188586 168 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm37162-201ENSMUST00000191708 551 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm43035-201ENSMUST00000197626 517 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm44962-201ENSMUST00000206460 279 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm18617-201ENSMUST00000222311 259 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Snora3-201ENSMUST00000083082 132 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Mir221-201ENSMUST00000083488 95 ntBASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ccdc38Q8CDN8 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm25421-201ENSMUST00000104218 164 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm13588-201ENSMUST00000120026 135 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm14574-201ENSMUST00000120644 279 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm24799-201ENSMUST00000178431 79 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm17067-202ENSMUST00000180131 123 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm35736-201ENSMUST00000203681 313 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.68□□□□□ -2.14
Ccdc38Q8CDN8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm23010-201ENSMUST00000104151 126 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm11862-201ENSMUST00000119678 659 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm25827-201ENSMUST00000157089 107 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm29229-201ENSMUST00000188874 323 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm38041-201ENSMUST00000194445 661 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm44960-201ENSMUST00000207403 141 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm45296-201ENSMUST00000209625 205 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm22364-201ENSMUST00000083097 98 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Mir320-201ENSMUST00000083594 82 ntBASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc38Q8CDN8 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Gm14782-201ENSMUST00000120151 195 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Gm11254-201ENSMUST00000122368 653 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Gm25805-201ENSMUST00000122788 108 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Mir32-201ENSMUST00000083610 70 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.66□□□□□ -2.14
Ccdc38Q8CDN8 Mir223-201ENSMUST00000102112 110 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Gm23951-201ENSMUST00000104029 132 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Gm9059-201ENSMUST00000118319 183 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Gm22963-201ENSMUST00000157960 91 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.65□□□□□ -2.15
Ccdc38Q8CDN8 Gm22447-201ENSMUST00000158155 92 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms