Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm15002-201ENSMUST00000118406 452 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm6444-201ENSMUST00000119611 458 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm25805-201ENSMUST00000122788 108 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm25362-201ENSMUST00000158854 105 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm7592-201ENSMUST00000160674 627 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm22264-201ENSMUST00000178200 107 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Mir7226-201ENSMUST00000184953 60 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm37763-201ENSMUST00000193445 120 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm38060-201ENSMUST00000194822 464 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm10222-201ENSMUST00000088336 294 ntBASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Atg4aQ8C9S8 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Mir875-201ENSMUST00000104698 78 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Mir1b-201ENSMUST00000117012 122 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm13714-201ENSMUST00000117313 221 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm23977-201ENSMUST00000177871 74 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm29005-201ENSMUST00000186773 320 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm26497-201ENSMUST00000083146 107 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.24□□□□□ -2.05
Atg4aQ8C9S8 Gm25090-201ENSMUST00000104000 132 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm15526-201ENSMUST00000112504 204 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm14215-201ENSMUST00000120578 221 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm22675-201ENSMUST00000158430 104 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm26468-201ENSMUST00000158644 106 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm22800-201ENSMUST00000175627 94 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm24656-201ENSMUST00000177548 132 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm22951-201ENSMUST00000179471 107 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Mir6950-201ENSMUST00000184438 73 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm27747-201ENSMUST00000184707 85 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm44555-201ENSMUST00000209008 148 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Atg4aQ8C9S8 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm26249-201ENSMUST00000116708 118 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22713-201ENSMUST00000116895 130 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22678-201ENSMUST00000116974 101 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm26105-201ENSMUST00000157253 190 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm26186-201ENSMUST00000157689 125 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22483-201ENSMUST00000157986 274 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm25012-201ENSMUST00000158396 164 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22666-201ENSMUST00000158717 164 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm29167-201ENSMUST00000190024 377 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Trbv6-201ENSMUST00000193743 276 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22571-201ENSMUST00000082984 70 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm22294-201ENSMUST00000083308 104 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.22□□□□□ -2.05
Atg4aQ8C9S8 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm23109-201ENSMUST00000116867 126 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm14774-201ENSMUST00000117857 536 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm15365-201ENSMUST00000122392 300 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm24909-201ENSMUST00000157290 280 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Mir669n-201ENSMUST00000158636 54 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm21827-201ENSMUST00000178247 423 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Mir376a-201ENSMUST00000197584 68 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm18991-201ENSMUST00000209225 746 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm29818-201ENSMUST00000218070 165 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Snord104-201ENSMUST00000083192 70 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm23246-201ENSMUST00000083371 67 ntBASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Atg4aQ8C9S8 Gm14792-201ENSMUST00000119725 258 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm24818-201ENSMUST00000175093 161 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm27271-201ENSMUST00000183509 170 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Gm25589-201ENSMUST00000082502 166 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.2□□□□□ -2.06
Atg4aQ8C9S8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Gm23950-201ENSMUST00000104026 129 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Snord70-201ENSMUST00000104157 87 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Gm24984-201ENSMUST00000104454 133 ntBASIC2.19□□□□□ -2.06
Atg4aQ8C9S8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms