Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Mir3535-201ENSMUST00000197651 147 ntBASIC2.5□□□□□ -2.01
Lig4Q8BTF7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.5□□□□□ -2.01
Lig4Q8BTF7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.5□□□□□ -2.01
Lig4Q8BTF7 Gm22154-201ENSMUST00000083844 131 ntBASIC2.5□□□□□ -2.01
Lig4Q8BTF7 Gm23040-201ENSMUST00000083869 163 ntBASIC2.5□□□□□ -2.01
Lig4Q8BTF7 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm22784-201ENSMUST00000104088 132 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm24867-201ENSMUST00000104161 107 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Snora36b-201ENSMUST00000104383 132 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm12304-201ENSMUST00000120312 385 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm5396-201ENSMUST00000121222 532 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Trav20-201ENSMUST00000142754 347 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm28020-201ENSMUST00000157739 67 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm23640-201ENSMUST00000157860 104 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm24799-201ENSMUST00000178431 79 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm37089-201ENSMUST00000195616 129 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm43978-201ENSMUST00000203491 451 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm5899-201ENSMUST00000071770 270 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm22062-201ENSMUST00000082563 107 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lig4Q8BTF7 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm22486-201ENSMUST00000116815 137 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm25783-201ENSMUST00000122525 190 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm24911-201ENSMUST00000157292 136 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Mir6353-201ENSMUST00000183596 113 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm27761-201ENSMUST00000184091 131 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm29014-201ENSMUST00000191422 326 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Trbv7-201ENSMUST00000193339 402 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.48□□□□□ -2.01
Lig4Q8BTF7 Gm25945-201ENSMUST00000122484 135 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm25543-201ENSMUST00000122678 312 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm23589-201ENSMUST00000157660 105 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm26412-201ENSMUST00000157666 55 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm24358-201ENSMUST00000158424 288 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm24813-201ENSMUST00000175310 84 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm24388-201ENSMUST00000177872 107 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm44256-201ENSMUST00000203304 335 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm45013-201ENSMUST00000206883 178 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Lig4Q8BTF7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Mir872-201ENSMUST00000104728 81 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm13432-201ENSMUST00000118861 241 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm12417-201ENSMUST00000119153 403 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm25392-201ENSMUST00000157335 297 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm22337-201ENSMUST00000157721 132 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm22450-201ENSMUST00000179641 107 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm25473-201ENSMUST00000180191 107 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Mir6399-201ENSMUST00000184050 84 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm29022-201ENSMUST00000190702 225 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm45907-201ENSMUST00000213023 193 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Lig4Q8BTF7 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm26071-201ENSMUST00000083261 107 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm24521-201ENSMUST00000083958 107 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm25628-201ENSMUST00000084002 105 ntBASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Lig4Q8BTF7 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm24121-201ENSMUST00000102029 106 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Mdga2-203ENSMUST00000113942 423 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm24892-201ENSMUST00000122747 104 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm25625-201ENSMUST00000157221 96 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm26105-201ENSMUST00000157253 190 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm24392-201ENSMUST00000158136 103 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm24667-201ENSMUST00000158938 103 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Mir3103-201ENSMUST00000175474 67 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm25457-201ENSMUST00000179509 107 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm27928-201ENSMUST00000183747 256 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm44533-201ENSMUST00000207782 268 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.45□□□□□ -2.02
Lig4Q8BTF7 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 193.6 ms