Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm15215-201ENSMUST00000117773 489 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm14922-201ENSMUST00000121131 163 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm22883-201ENSMUST00000157376 106 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm24075-201ENSMUST00000158175 72 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm7958-201ENSMUST00000178255 468 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm7950-201ENSMUST00000179633 468 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm27402-201ENSMUST00000183890 120 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm28453-203ENSMUST00000187041 189 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm24625-201ENSMUST00000082622 130 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Gm25124-201ENSMUST00000083345 164 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Mir127-201ENSMUST00000093568 70 ntBASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ubfd1Q78JW9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm11285-201ENSMUST00000118443 322 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm12417-201ENSMUST00000119153 403 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm12042-201ENSMUST00000120479 301 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm22535-201ENSMUST00000158174 119 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm24358-201ENSMUST00000158424 288 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm25711-201ENSMUST00000158633 128 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Snora15-201ENSMUST00000177461 131 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm27545-201ENSMUST00000184755 202 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Trbv7-201ENSMUST00000193339 402 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm44564-201ENSMUST00000207985 180 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm46389-201ENSMUST00000223199 392 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm24977-201ENSMUST00000083106 163 ntBASIC2.46□□□□□ -2.02
Ubfd1Q78JW9 Gm24423-201ENSMUST00000101982 106 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm24374-201ENSMUST00000104394 106 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm25945-201ENSMUST00000122484 135 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm24598-201ENSMUST00000122510 74 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm26406-201ENSMUST00000158503 124 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm26287-201ENSMUST00000158887 81 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm24813-201ENSMUST00000175310 84 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm23963-201ENSMUST00000179603 77 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Mir6336-201ENSMUST00000183581 130 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm37918-201ENSMUST00000192071 120 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm32175-201ENSMUST00000193641 346 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 Gm24966-201ENSMUST00000082443 79 ntBASIC2.45□□□□□ -2.02
Ubfd1Q78JW9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm22151-201ENSMUST00000116963 58 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm23889-201ENSMUST00000122689 104 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm25115-201ENSMUST00000157187 140 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm22281-201ENSMUST00000157198 103 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm25664-201ENSMUST00000157697 107 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm27579-201ENSMUST00000158113 63 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm25863-201ENSMUST00000158249 329 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm24771-201ENSMUST00000158508 137 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Mir6376-201ENSMUST00000185149 131 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Gm42834-201ENSMUST00000196845 256 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Snord7-201ENSMUST00000083781 97 ntBASIC2.44□□□□□ -2.02
Ubfd1Q78JW9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm13756-201ENSMUST00000117618 222 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm12143-201ENSMUST00000119666 332 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm25961-201ENSMUST00000157174 135 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm23858-201ENSMUST00000158384 106 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm26426-201ENSMUST00000177866 123 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm22450-201ENSMUST00000179641 107 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm26060-201ENSMUST00000180094 123 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm25473-201ENSMUST00000180191 107 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm42807-201ENSMUST00000200141 329 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm10092-201ENSMUST00000077110 180 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm24856-201ENSMUST00000082809 107 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm26495-201ENSMUST00000083152 137 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm26071-201ENSMUST00000083261 107 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm22972-201ENSMUST00000083297 131 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm24521-201ENSMUST00000083958 107 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Ubfd1Q78JW9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm2830-201ENSMUST00000140330 385 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm25866-201ENSMUST00000158245 112 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Mir7116-201ENSMUST00000195956 70 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm42774-201ENSMUST00000198854 283 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm44320-201ENSMUST00000199276 86 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm44903-201ENSMUST00000206840 130 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Mir340-201ENSMUST00000083483 98 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm23039-201ENSMUST00000083870 161 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Ubfd1Q78JW9 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.41□□□□□ -2.02
Ubfd1Q78JW9 Gm22784-201ENSMUST00000104088 132 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 166.5 ms