Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 Gm23848-201ENSMUST00000083826 106 ntBASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.1□□□□□ -2.39
Topbp1Q6ZQF0 Gm14551-201ENSMUST00000120802 256 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm44396-201ENSMUST00000199843 114 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm38395-201ENSMUST00000199904 830 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm45374-201ENSMUST00000211388 136 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Gm30738-201ENSMUST00000221346 502 ntBASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
Topbp1Q6ZQF0 Mir293-201ENSMUST00000104841 80 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Mir466m-201ENSMUST00000175052 84 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm44449-201ENSMUST00000203610 153 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm25611-201ENSMUST00000104017 133 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm15010-201ENSMUST00000117153 407 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm22942-201ENSMUST00000158563 124 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm20257-202ENSMUST00000188643 130 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Gm43529-201ENSMUST00000199178 412 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.08□□□□□ -2.4
Topbp1Q6ZQF0 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm15266-201ENSMUST00000119635 255 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm24892-201ENSMUST00000122747 104 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm25805-201ENSMUST00000122788 108 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm23538-201ENSMUST00000157535 101 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm34783-201ENSMUST00000209159 303 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm24610-201ENSMUST00000083270 109 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Topbp1Q6ZQF0 Gm22489-201ENSMUST00000116813 62 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm15175-201ENSMUST00000117629 132 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm11849-201ENSMUST00000121293 261 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm23331-201ENSMUST00000157423 108 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm25334-201ENSMUST00000158036 110 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm17528-201ENSMUST00000171026 239 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm24713-201ENSMUST00000178850 107 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm25448-201ENSMUST00000180065 107 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm27676-201ENSMUST00000183669 61 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm29661-201ENSMUST00000186781 315 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm29308-201ENSMUST00000188863 315 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm38231-201ENSMUST00000192030 347 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm43004-201ENSMUST00000201872 703 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Mir340-201ENSMUST00000083483 98 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Mir411-201ENSMUST00000083543 82 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm23058-201ENSMUST00000093703 107 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.06□□□□□ -2.4
Topbp1Q6ZQF0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Gm12837-201ENSMUST00000120131 373 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Gm24549-201ENSMUST00000158647 139 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Mir3964-201ENSMUST00000174898 74 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Mir3079-201ENSMUST00000175428 90 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.05□□□□□ -2.4
Topbp1Q6ZQF0 Gm11904-201ENSMUST00000120562 248 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 Gm16359-201ENSMUST00000124511 289 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 Snord49b-201ENSMUST00000082503 72 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.04□□□□□ -2.4
Topbp1Q6ZQF0 Gm14887-201ENSMUST00000119522 663 ntBASIC0.03□□□□□ -2.4
Topbp1Q6ZQF0 Gm23144-201ENSMUST00000180226 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms