Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm26077-201ENSMUST00000104064 123 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm12417-201ENSMUST00000119153 403 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm11572-201ENSMUST00000119164 120 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm11862-201ENSMUST00000119678 659 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm22479-201ENSMUST00000122566 81 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm23324-201ENSMUST00000157421 131 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm24900-201ENSMUST00000158128 134 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm25450-201ENSMUST00000179144 107 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm25253-201ENSMUST00000179958 107 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Mir7017-201ENSMUST00000184894 62 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm3724-201ENSMUST00000197957 349 ntBASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Smarca1Q6PGB8 Gm23983-201ENSMUST00000157142 114 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm22554-201ENSMUST00000157798 147 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm29665-201ENSMUST00000191457 528 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm43993-201ENSMUST00000203972 247 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm44655-201ENSMUST00000207768 423 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm45296-201ENSMUST00000209625 205 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm22299-201ENSMUST00000082663 136 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Gm25788-201ENSMUST00000082721 131 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Mir300-201ENSMUST00000083485 79 ntBASIC2.38□□□□□ -2.03
Smarca1Q6PGB8 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Gm11854-201ENSMUST00000117839 446 ntBASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Gm22159-201ENSMUST00000158412 130 ntBASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Gm17067-202ENSMUST00000180131 123 ntBASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Gm25078-201ENSMUST00000082530 107 ntBASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Smarca1Q6PGB8 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm23013-201ENSMUST00000104146 106 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm22221-201ENSMUST00000157362 103 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm23670-201ENSMUST00000157469 119 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm23535-201ENSMUST00000157542 106 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm23033-201ENSMUST00000157996 134 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm22731-201ENSMUST00000158086 94 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm45150-201ENSMUST00000206051 467 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Mir340-201ENSMUST00000083483 98 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.36□□□□□ -2.03
Smarca1Q6PGB8 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Mir374b-201ENSMUST00000102314 95 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm22814-201ENSMUST00000157452 104 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm22216-201ENSMUST00000157557 114 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm24237-201ENSMUST00000157790 132 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm24177-201ENSMUST00000158927 131 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm22448-201ENSMUST00000179254 107 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Mir7026-201ENSMUST00000184384 67 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm18357-201ENSMUST00000188184 580 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm44373-201ENSMUST00000196112 169 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm5899-201ENSMUST00000071770 270 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm24625-201ENSMUST00000082622 130 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Mir423-201ENSMUST00000083584 109 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm23845-201ENSMUST00000083834 152 ntBASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Smarca1Q6PGB8 Gm24098-201ENSMUST00000102075 109 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm25381-201ENSMUST00000102078 109 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm22338-201ENSMUST00000157715 129 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm24501-201ENSMUST00000158452 62 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm25368-201ENSMUST00000158847 131 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm23474-201ENSMUST00000158884 75 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm27793-201ENSMUST00000183405 76 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Gm28058-201ENSMUST00000186421 264 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.34□□□□□ -2.03
Smarca1Q6PGB8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm23015-201ENSMUST00000104145 128 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm14588-201ENSMUST00000119895 172 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Mir1936-201ENSMUST00000158699 93 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm24818-201ENSMUST00000175093 161 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm27997-201ENSMUST00000184942 69 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm29147-201ENSMUST00000186846 315 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm29227-201ENSMUST00000187139 315 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm29034-201ENSMUST00000188099 315 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm28160-201ENSMUST00000191229 315 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm37763-201ENSMUST00000193445 120 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm37801-201ENSMUST00000194754 274 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm37129-201ENSMUST00000195791 315 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm43512-201ENSMUST00000198495 176 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm43406-201ENSMUST00000200356 334 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Mir7227-201ENSMUST00000200408 59 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Gm20144-201ENSMUST00000203031 165 ntBASIC2.33□□□□□ -2.04
Smarca1Q6PGB8 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 214.8 ms