Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Mir758-201ENSMUST00000103260 81 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm25938-201ENSMUST00000104139 166 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm14001-201ENSMUST00000118847 247 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm12647-201ENSMUST00000118977 265 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm24635-201ENSMUST00000122712 128 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm24896-201ENSMUST00000122741 135 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm24308-201ENSMUST00000177773 114 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm28257-201ENSMUST00000185244 463 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm28724-201ENSMUST00000186149 625 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm28848-201ENSMUST00000189984 168 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm37162-201ENSMUST00000191708 551 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm42594-201ENSMUST00000199511 246 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Snord43-201ENSMUST00000199549 108 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm45005-201ENSMUST00000206640 157 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm45296-201ENSMUST00000209625 205 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm25930-201ENSMUST00000082785 107 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Mir32-201ENSMUST00000083610 70 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm25628-201ENSMUST00000084002 105 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Snrnp40Q6PE01 Gm13729-201ENSMUST00000120328 406 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Gm12926-201ENSMUST00000121158 409 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Gm24629-201ENSMUST00000122762 89 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Gm23980-201ENSMUST00000157135 158 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Mir669n-201ENSMUST00000158636 54 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Gm18357-201ENSMUST00000188184 580 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Mir3961-201ENSMUST00000198795 59 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Mir1291-201ENSMUST00000199842 117 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 AC127578.1-201ENSMUST00000227289 93 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Snora34-201ENSMUST00000083402 138 ntBASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Snrnp40Q6PE01 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm23766-201ENSMUST00000103894 80 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm25421-201ENSMUST00000104218 164 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm23109-201ENSMUST00000116867 126 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Mir1898-201ENSMUST00000122643 83 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm25543-201ENSMUST00000122678 312 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm8121-201ENSMUST00000153583 499 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm24237-201ENSMUST00000157790 132 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm24348-201ENSMUST00000158710 130 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm16561-201ENSMUST00000163001 192 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm25450-201ENSMUST00000179144 107 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm43250-201ENSMUST00000196536 273 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm45445-201ENSMUST00000209586 232 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm22723-201ENSMUST00000083820 129 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.92□□□□□ -2.1
Snrnp40Q6PE01 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm24098-201ENSMUST00000102075 109 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm25381-201ENSMUST00000102078 109 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm22598-201ENSMUST00000157600 127 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm28288-201ENSMUST00000191019 214 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm43427-201ENSMUST00000198188 331 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm23055-201ENSMUST00000082805 94 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Mir301-201ENSMUST00000083655 86 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Mir151-201ENSMUST00000083678 68 ntBASIC1.91□□□□□ -2.1
Snrnp40Q6PE01 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.9□□□□□ -2.1
Snrnp40Q6PE01 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Mir1b-201ENSMUST00000117012 122 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm14782-201ENSMUST00000120151 195 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm23043-201ENSMUST00000157890 109 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm24847-201ENSMUST00000158032 108 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm23858-201ENSMUST00000158384 106 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm24501-201ENSMUST00000158452 62 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Mir3086-201ENSMUST00000175072 87 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm23921-201ENSMUST00000175258 107 ntBASIC1.9□□□□□ -2.11
Snrnp40Q6PE01 Gm22448-201ENSMUST00000179254 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms