Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.03□□□□□ -2.08
Six2Q62232 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.03□□□□□ -2.08
Six2Q62232 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.03□□□□□ -2.08
Six2Q62232 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.03□□□□□ -2.08
Six2Q62232 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.03□□□□□ -2.08
Six2Q62232 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.03□□□□□ -2.08
Six2Q62232 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Six2Q62232 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.03□□□□□ -2.08
Six2Q62232 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.03□□□□□ -2.08
Six2Q62232 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.03□□□□□ -2.08
Six2Q62232 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.03□□□□□ -2.08
Six2Q62232 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Six2Q62232 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Six2Q62232 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm22713-201ENSMUST00000116895 130 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm22678-201ENSMUST00000116974 101 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm14215-201ENSMUST00000120578 221 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm15365-201ENSMUST00000122392 300 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm26105-201ENSMUST00000157253 190 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm23852-201ENSMUST00000158376 77 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm25643-201ENSMUST00000158874 103 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Mir5118-201ENSMUST00000175551 67 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm21827-201ENSMUST00000178247 423 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm27271-201ENSMUST00000183509 170 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm29167-201ENSMUST00000190024 377 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Trbv6-201ENSMUST00000193743 276 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.02□□□□□ -2.09
Six2Q62232 Gm44478-201ENSMUST00000204875 114 ntBASIC2.02□□□□□ -2.09
Six2Q62232 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.02□□□□□ -2.09
Six2Q62232 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Six2Q62232 Mir222-201ENSMUST00000083537 79 ntBASIC2.02□□□□□ -2.09
Six2Q62232 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Six2Q62232 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.02□□□□□ -2.09
Six2Q62232 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.02□□□□□ -2.09
Six2Q62232 Gm14774-201ENSMUST00000117857 536 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.01□□□□□ -2.09
Six2Q62232 Gm25184-201ENSMUST00000157753 163 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Gm25012-201ENSMUST00000158396 164 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Gm6801-201ENSMUST00000190697 339 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Gm44533-201ENSMUST00000207782 268 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.01□□□□□ -2.09
Six2Q62232 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.01□□□□□ -2.09
Six2Q62232 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.01□□□□□ -2.09
Six2Q62232 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Six2Q62232 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Six2Q62232 n-R5s67-201ENSMUST00000104336 114 ntBASIC2□□□□□ -2.09
Six2Q62232 n-R5s26-201ENSMUST00000104601 122 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm11936-201ENSMUST00000118323 160 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2□□□□□ -2.09
Six2Q62232 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2□□□□□ -2.09
Six2Q62232 Gm22215-201ENSMUST00000157558 96 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm22315-201ENSMUST00000158010 143 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm25718-201ENSMUST00000158632 118 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm24818-201ENSMUST00000175093 161 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm28849-201ENSMUST00000188127 174 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm29140-201ENSMUST00000190187 476 ntBASIC2□□□□□ -2.09
Six2Q62232 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm28330-201ENSMUST00000190353 171 ntBASIC2□□□□□ -2.09
Six2Q62232 Trbv7-201ENSMUST00000193339 402 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2□□□□□ -2.09
Six2Q62232 AC154271.1-201ENSMUST00000224780 383 ntBASIC2□□□□□ -2.09
Six2Q62232 AC173482.4-201ENSMUST00000225096 348 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm25589-201ENSMUST00000082502 166 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm25199-201ENSMUST00000083095 104 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm23246-201ENSMUST00000083371 67 ntBASIC2□□□□□ -2.09
Six2Q62232 Gm24116-201ENSMUST00000103975 107 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm25875-201ENSMUST00000104323 107 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm12351-201ENSMUST00000118727 292 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm26479-201ENSMUST00000122620 106 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.99□□□□□ -2.09
Six2Q62232 Gm26186-201ENSMUST00000157689 125 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm23813-201ENSMUST00000175153 77 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.99□□□□□ -2.09
Six2Q62232 Gm19901-201ENSMUST00000192191 495 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Mir378a-201ENSMUST00000198300 66 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.99□□□□□ -2.09
Six2Q62232 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.99□□□□□ -2.09
Six2Q62232 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.99□□□□□ -2.09
Six2Q62232 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Six2Q62232 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.99□□□□□ -2.09
Six2Q62232 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Six2Q62232 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Six2Q62232 Gm25090-201ENSMUST00000104000 132 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm24984-201ENSMUST00000104454 133 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm15536-201ENSMUST00000121411 114 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm16355-201ENSMUST00000128606 231 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm25392-201ENSMUST00000157335 297 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm25059-201ENSMUST00000157367 117 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm22537-201ENSMUST00000158172 199 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm24656-201ENSMUST00000177548 132 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm17067-202ENSMUST00000180131 123 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Mir6950-201ENSMUST00000184438 73 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm26265-202ENSMUST00000196326 133 ntBASIC1.98□□□□□ -2.09
Six2Q62232 Gm18991-201ENSMUST00000209225 746 ntBASIC1.98□□□□□ -2.09
Six2Q62232 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.98□□□□□ -2.09
Six2Q62232 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.98□□□□□ -2.09
Six2Q62232 Gm22683-201ENSMUST00000082854 137 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms