Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.07□□□□□ -2.08
Trim27Q62158 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trim27Q62158 Gm24615-201ENSMUST00000083268 113 ntBASIC2.07□□□□□ -2.08
Trim27Q62158 Mir496a-201ENSMUST00000093627 79 ntBASIC2.07□□□□□ -2.08
Trim27Q62158 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim27Q62158 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim27Q62158 Gm15526-201ENSMUST00000112504 204 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Gm26181-201ENSMUST00000157687 106 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Gm22085-201ENSMUST00000158344 110 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Gm44654-201ENSMUST00000208052 329 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Gm22685-201ENSMUST00000082848 106 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.06□□□□□ -2.08
Trim27Q62158 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim27Q62158 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim27Q62158 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trim27Q62158 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Mir1b-201ENSMUST00000117012 122 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Gm24174-201ENSMUST00000158933 111 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Gm23090-201ENSMUST00000177331 78 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Gm10264-201ENSMUST00000220589 429 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Gm5899-201ENSMUST00000071770 270 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.05□□□□□ -2.08
Trim27Q62158 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trim27Q62158 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trim27Q62158 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.04□□□□□ -2.08
Trim27Q62158 Gm15692-201ENSMUST00000152173 352 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm23469-201ENSMUST00000157131 104 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm26150-201ENSMUST00000157426 151 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm22598-201ENSMUST00000157600 127 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm16162-201ENSMUST00000162296 297 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm26435-201ENSMUST00000179026 107 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm17067-202ENSMUST00000180131 123 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Mir6995-201ENSMUST00000183658 71 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm9156-201ENSMUST00000189660 463 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm43035-201ENSMUST00000197626 517 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm25820-201ENSMUST00000198589 127 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm43993-201ENSMUST00000203972 247 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm24151-201ENSMUST00000082758 141 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Gm25937-201ENSMUST00000083912 107 ntBASIC2.04□□□□□ -2.08
Trim27Q62158 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim27Q62158 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trim27Q62158 Gm22080-201ENSMUST00000157591 106 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm22551-201ENSMUST00000157795 103 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm24851-201ENSMUST00000158028 103 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm25371-201ENSMUST00000158162 101 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm22075-201ENSMUST00000158599 192 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Mir1936-201ENSMUST00000158699 93 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trim27Q62158 Gm20477-201ENSMUST00000174028 280 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Snord87-201ENSMUST00000175437 87 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm24390-201ENSMUST00000179578 62 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm26864-201ENSMUST00000181346 156 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm28383-201ENSMUST00000187563 139 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm29262-201ENSMUST00000190084 196 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Gm37313-201ENSMUST00000191673 290 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.03□□□□□ -2.08
Trim27Q62158 Gm25636-201ENSMUST00000082666 133 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Snord118-201ENSMUST00000082965 135 ntBASIC2.03□□□□□ -2.08
Trim27Q62158 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim27Q62158 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm23013-201ENSMUST00000104146 106 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm24079-201ENSMUST00000104352 132 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm25805-201ENSMUST00000122788 108 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.02□□□□□ -2.09
Trim27Q62158 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim27Q62158 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm26968-201ENSMUST00000182894 481 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm29657-201ENSMUST00000189807 342 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm37338-201ENSMUST00000191986 127 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm18433-201ENSMUST00000192747 197 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trim27Q62158 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm43976-201ENSMUST00000203637 235 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm44687-201ENSMUST00000204975 235 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Mir340-201ENSMUST00000083483 98 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Mir32-201ENSMUST00000083610 70 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm26329-201ENSMUST00000093723 110 ntBASIC2.02□□□□□ -2.09
Trim27Q62158 Gm11854-201ENSMUST00000117839 446 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Gm23535-201ENSMUST00000157542 106 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Gm24504-201ENSMUST00000157679 100 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Rnu7-201ENSMUST00000158458 62 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Gm27511-201ENSMUST00000183502 127 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Mir6388-201ENSMUST00000184417 75 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Gm28717-201ENSMUST00000189950 315 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 Gm43578-201ENSMUST00000201250 459 ntBASIC2.01□□□□□ -2.09
Trim27Q62158 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.01□□□□□ -2.09
Trim27Q62158 Gm24536-201ENSMUST00000083144 107 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms