Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm24661-201ENSMUST00000083205 104 ntBASIC2.58□□□□□ -2
Ift88Q61371 Snora34-201ENSMUST00000083402 138 ntBASIC2.58□□□□□ -2
Ift88Q61371 Gm23039-201ENSMUST00000083870 161 ntBASIC2.58□□□□□ -2
Ift88Q61371 Gm24164-201ENSMUST00000093663 104 ntBASIC2.58□□□□□ -2
Ift88Q61371 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Ift88Q61371 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ift88Q61371 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Ift88Q61371 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ift88Q61371 Gm12797-201ENSMUST00000118645 273 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm24392-201ENSMUST00000158136 103 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm24053-201ENSMUST00000158620 105 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm24667-201ENSMUST00000158938 103 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm25024-201ENSMUST00000179667 104 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm25253-201ENSMUST00000179958 107 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm28627-201ENSMUST00000186141 453 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm44482-201ENSMUST00000199232 103 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm44666-201ENSMUST00000208544 391 ntBASIC2.57□□□□□ -2
Ift88Q61371 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm45907-201ENSMUST00000213023 193 ntBASIC2.57□□□□□ -2
Ift88Q61371 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm22249-201ENSMUST00000082485 136 ntBASIC2.57□□□□□ -2
Ift88Q61371 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ift88Q61371 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ift88Q61371 Gm22752-201ENSMUST00000102083 109 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm25943-201ENSMUST00000103791 90 ntBASIC2.56□□□□□ -2
Ift88Q61371 Mir466b-7-201ENSMUST00000103804 88 ntBASIC2.56□□□□□ -2
Ift88Q61371 Mir466b-5-201ENSMUST00000103900 88 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm23705-201ENSMUST00000104370 130 ntBASIC2.56□□□□□ -2
Ift88Q61371 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ift88Q61371 Gm25910-201ENSMUST00000157620 140 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm25615-201ENSMUST00000177836 94 ntBASIC2.56□□□□□ -2
Ift88Q61371 Mir466b-4-201ENSMUST00000178801 90 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm25285-201ENSMUST00000178951 90 ntBASIC2.56□□□□□ -2
Ift88Q61371 Mir466b-6-201ENSMUST00000180061 90 ntBASIC2.56□□□□□ -2
Ift88Q61371 Mir466c-2-201ENSMUST00000180211 90 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm29657-201ENSMUST00000189807 342 ntBASIC2.56□□□□□ -2
Ift88Q61371 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.56□□□□□ -2
Ift88Q61371 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ift88Q61371 Gm24625-201ENSMUST00000082622 130 ntBASIC2.56□□□□□ -2
Ift88Q61371 Gm25124-201ENSMUST00000083345 164 ntBASIC2.56□□□□□ -2
Ift88Q61371 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ift88Q61371 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ift88Q61371 Gm25421-201ENSMUST00000104218 164 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm23175-201ENSMUST00000104371 132 ntBASIC2.55□□□□□ -2
Ift88Q61371 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm12412-201ENSMUST00000121867 328 ntBASIC2.55□□□□□ -2
Ift88Q61371 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm22083-201ENSMUST00000157586 102 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm24958-201ENSMUST00000158009 97 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm24769-201ENSMUST00000158506 129 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm23860-201ENSMUST00000179446 132 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm27991-201ENSMUST00000184804 137 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm32175-201ENSMUST00000193641 346 ntBASIC2.55□□□□□ -2
Ift88Q61371 Gm15235-201ENSMUST00000200572 194 ntBASIC2.55□□□□□ -2
Ift88Q61371 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Ift88Q61371 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ift88Q61371 Gm24204-201ENSMUST00000082950 107 ntBASIC2.55□□□□□ -2
Ift88Q61371 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.55□□□□□ -2
Ift88Q61371 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Ift88Q61371 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.55□□□□□ -2
Ift88Q61371 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ift88Q61371 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.54□□□□□ -2
Ift88Q61371 Mir542-201ENSMUST00000102186 85 ntBASIC2.54□□□□□ -2
Ift88Q61371 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ift88Q61371 Gm12143-201ENSMUST00000119666 332 ntBASIC2.54□□□□□ -2
Ift88Q61371 Gm12815-201ENSMUST00000121737 135 ntBASIC2.54□□□□□ -2
Ift88Q61371 Gm16561-201ENSMUST00000163001 192 ntBASIC2.54□□□□□ -2
Ift88Q61371 Mir28b-201ENSMUST00000175399 80 ntBASIC2.54□□□□□ -2
Ift88Q61371 Gm42774-201ENSMUST00000198854 283 ntBASIC2.54□□□□□ -2
Ift88Q61371 Mir340-201ENSMUST00000083483 98 ntBASIC2.54□□□□□ -2
Ift88Q61371 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ift88Q61371 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ift88Q61371 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ift88Q61371 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ift88Q61371 Mir467g-201ENSMUST00000116906 120 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm16021-201ENSMUST00000121176 219 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm22281-201ENSMUST00000157198 103 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm27753-201ENSMUST00000184742 203 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm28992-201ENSMUST00000190534 139 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm37918-201ENSMUST00000192071 120 ntBASIC2.53□□□□□ -2
Ift88Q61371 Mir7215-201ENSMUST00000200383 51 ntBASIC2.53□□□□□ -2
Ift88Q61371 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.53□□□□□ -2
Ift88Q61371 Gm11351-202ENSMUST00000225724 478 ntBASIC2.53□□□□□ -2
Ift88Q61371 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm24977-201ENSMUST00000083106 163 ntBASIC2.53□□□□□ -2
Ift88Q61371 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ift88Q61371 Gm23492-201ENSMUST00000116837 115 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm12417-201ENSMUST00000119153 403 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm25373-201ENSMUST00000158156 115 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm24729-201ENSMUST00000158225 137 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm25866-201ENSMUST00000158245 112 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm23258-201ENSMUST00000158319 106 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm25749-201ENSMUST00000175485 111 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm42834-201ENSMUST00000196845 256 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm44564-201ENSMUST00000207985 180 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Gm22972-201ENSMUST00000083297 131 ntBASIC2.52□□□□□ -2.01
Ift88Q61371 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ift88Q61371 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms