Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm25170-201ENSMUST00000104191 129 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm22709-201ENSMUST00000116893 111 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm6829-201ENSMUST00000119858 360 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.42□□□□□ -2.18
Usf1Q61069 Gm26049-201ENSMUST00000157313 108 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Mir6346-201ENSMUST00000183982 81 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Mir7059-201ENSMUST00000184825 59 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm29397-201ENSMUST00000185205 333 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm43367-201ENSMUST00000199986 625 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.42□□□□□ -2.18
Usf1Q61069 Gm45704-201ENSMUST00000212582 403 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Usf1Q61069 Gm24615-201ENSMUST00000083268 113 ntBASIC1.42□□□□□ -2.18
Usf1Q61069 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Usf1Q61069 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Mir343-201ENSMUST00000102360 75 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm11854-201ENSMUST00000117839 446 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm13729-201ENSMUST00000120328 406 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm26150-201ENSMUST00000157426 151 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm25333-201ENSMUST00000158035 246 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm25976-201ENSMUST00000158695 130 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm24154-201ENSMUST00000175261 130 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Mir3098-201ENSMUST00000175416 87 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.41□□□□□ -2.18
Usf1Q61069 Gm26265-202ENSMUST00000196326 133 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Usf1Q61069 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Gm23100-201ENSMUST00000083455 141 ntBASIC1.41□□□□□ -2.18
Usf1Q61069 Mir872-201ENSMUST00000104728 81 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm14803-201ENSMUST00000117163 361 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm15861-201ENSMUST00000120979 339 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm11254-201ENSMUST00000122368 653 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm23329-201ENSMUST00000157415 108 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm24851-201ENSMUST00000158028 103 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm25035-201ENSMUST00000175414 77 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm21754-201ENSMUST00000177550 479 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm23660-201ENSMUST00000178362 79 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm24088-201ENSMUST00000179100 79 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm24390-201ENSMUST00000179578 62 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Mir7052-201ENSMUST00000184821 65 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm28489-201ENSMUST00000186655 316 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm42622-201ENSMUST00000197229 355 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm38395-201ENSMUST00000199904 830 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm45365-201ENSMUST00000209489 256 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.4□□□□□ -2.19
Usf1Q61069 Mir448-201ENSMUST00000083516 112 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm26164-201ENSMUST00000083793 104 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm23041-201ENSMUST00000083868 106 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
Usf1Q61069 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Usf1Q61069 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.4□□□□□ -2.19
Usf1Q61069 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Usf1Q61069 Gm13714-201ENSMUST00000117313 221 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm14301-201ENSMUST00000120181 324 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.39□□□□□ -2.19
Usf1Q61069 Gm22113-201ENSMUST00000158343 104 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm23854-201ENSMUST00000158378 108 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm24348-201ENSMUST00000158710 130 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Usf1Q61069 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Usf1Q61069 Gm43723-201ENSMUST00000196886 189 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm33866-201ENSMUST00000196911 289 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Usf1Q61069 Gm44384-201ENSMUST00000200208 114 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm43578-201ENSMUST00000201250 459 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm45907-201ENSMUST00000213023 193 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Gm5899-201ENSMUST00000071770 270 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Snord118-201ENSMUST00000082965 135 ntBASIC1.39□□□□□ -2.19
Usf1Q61069 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Usf1Q61069 Mir223-201ENSMUST00000102112 110 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm26301-201ENSMUST00000104813 95 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Usf1Q61069 Gm23435-201ENSMUST00000157183 156 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm24498-201ENSMUST00000158445 102 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm26405-201ENSMUST00000158495 100 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm20462-201ENSMUST00000172623 408 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm24810-201ENSMUST00000175317 70 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm25253-201ENSMUST00000179958 107 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Usf1Q61069 Gm9156-201ENSMUST00000189660 463 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm36953-201ENSMUST00000195295 268 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm43035-201ENSMUST00000197626 517 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm45456-201ENSMUST00000210841 243 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Usf1Q61069 Gm24536-201ENSMUST00000083144 107 ntBASIC1.38□□□□□ -2.19
Usf1Q61069 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms