Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm27369-201ENSMUST00000185182 71 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Gm6109-201ENSMUST00000223297 348 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Gm5899-201ENSMUST00000071770 270 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Gm23451-201ENSMUST00000083328 122 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Mir29c-201ENSMUST00000083614 88 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Gm25628-201ENSMUST00000084002 105 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.26□□□□□ -2.05
ClpbQ60649 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm22752-201ENSMUST00000102083 109 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm25421-201ENSMUST00000104218 164 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm25315-201ENSMUST00000116823 121 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm13880-201ENSMUST00000118421 474 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm26479-201ENSMUST00000122620 106 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm25392-201ENSMUST00000157335 297 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm22315-201ENSMUST00000158010 143 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm25863-201ENSMUST00000158249 329 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Gm23858-201ENSMUST00000158384 106 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Mir1936-201ENSMUST00000158699 93 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ClpbQ60649 Mir465d-201ENSMUST00000196314 58 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Mir340-201ENSMUST00000083483 98 ntBASIC2.25□□□□□ -2.05
ClpbQ60649 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ClpbQ60649 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ClpbQ60649 Gm24835-201ENSMUST00000116777 111 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Gm12417-201ENSMUST00000119153 403 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Gm14792-201ENSMUST00000119725 258 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Gm24909-201ENSMUST00000157290 280 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Mir7068-201ENSMUST00000183439 74 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Gm27747-201ENSMUST00000184707 85 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Gm24698-201ENSMUST00000083883 130 ntBASIC2.24□□□□□ -2.05
ClpbQ60649 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ClpbQ60649 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ClpbQ60649 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ClpbQ60649 Gm26342-201ENSMUST00000104557 129 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm25529-201ENSMUST00000104850 92 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm24598-201ENSMUST00000122510 74 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm22027-201ENSMUST00000122737 127 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.23□□□□□ -2.05
ClpbQ60649 Gm23642-201ENSMUST00000157858 258 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm22947-201ENSMUST00000158559 91 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm25707-201ENSMUST00000175120 96 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm26092-201ENSMUST00000179798 97 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
ClpbQ60649 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.23□□□□□ -2.05
ClpbQ60649 Mir6925-201ENSMUST00000197857 70 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Mir3069-201ENSMUST00000198802 65 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm43220-201ENSMUST00000199299 282 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.23□□□□□ -2.05
ClpbQ60649 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm25789-201ENSMUST00000083294 76 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.23□□□□□ -2.05
ClpbQ60649 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
ClpbQ60649 Mir374b-201ENSMUST00000102314 95 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Mir669g-201ENSMUST00000116809 123 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm26156-201ENSMUST00000116999 123 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm14652-201ENSMUST00000118479 235 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm12143-201ENSMUST00000119666 332 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm22984-201ENSMUST00000122751 122 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm25961-201ENSMUST00000157174 135 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm25115-201ENSMUST00000157187 140 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm37377-201ENSMUST00000191733 304 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ClpbQ60649 Gm42807-201ENSMUST00000200141 329 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm25141-201ENSMUST00000083177 107 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm24163-201ENSMUST00000093660 132 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.22□□□□□ -2.05
ClpbQ60649 Gm25875-201ENSMUST00000104323 107 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
ClpbQ60649 Mir5118-201ENSMUST00000175551 67 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Gm7958-201ENSMUST00000178255 468 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Gm7950-201ENSMUST00000179633 468 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Gm44409-201ENSMUST00000198810 166 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC2.21□□□□□ -2.06
ClpbQ60649 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
ClpbQ60649 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ClpbQ60649 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm26280-201ENSMUST00000157096 101 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm22281-201ENSMUST00000157198 103 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm23640-201ENSMUST00000157860 104 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm24837-201ENSMUST00000158683 81 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm28453-203ENSMUST00000187041 189 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm29140-201ENSMUST00000190187 476 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Mir378a-201ENSMUST00000198300 66 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 Gm45543-201ENSMUST00000209327 88 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.2□□□□□ -2.06
ClpbQ60649 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms