Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Snora3-201ENSMUST00000083082 132 ntBASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Gm24615-201ENSMUST00000083268 113 ntBASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Gm23041-201ENSMUST00000083868 106 ntBASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.74□□□□□ -2.13
Trim38Q5SZ99 Gm23109-201ENSMUST00000116867 126 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Mir1936-201ENSMUST00000158699 93 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Mir7679-201ENSMUST00000183379 63 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Gm7654-201ENSMUST00000186738 683 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Gm28453-203ENSMUST00000187041 189 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Gm45907-201ENSMUST00000213023 193 ntBASIC1.73□□□□□ -2.13
Trim38Q5SZ99 Mir223-201ENSMUST00000102112 110 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Gm11254-201ENSMUST00000122368 653 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Mir7683-201ENSMUST00000183842 61 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Gm10105-201ENSMUST00000184601 270 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Gm25820-202ENSMUST00000197479 128 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Gm24406-201ENSMUST00000083026 128 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Mir221-201ENSMUST00000083488 95 ntBASIC1.72□□□□□ -2.13
Trim38Q5SZ99 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Mir758-201ENSMUST00000103260 81 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm15861-201ENSMUST00000120979 339 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm22027-201ENSMUST00000122737 127 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm22665-201ENSMUST00000158720 275 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm26159-201ENSMUST00000158968 104 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm23186-201ENSMUST00000180078 107 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Mir6352-201ENSMUST00000184495 116 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm28383-201ENSMUST00000187563 139 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm29262-201ENSMUST00000190084 196 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm45456-201ENSMUST00000210841 243 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Snord118-201ENSMUST00000082965 135 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Gm23100-201ENSMUST00000083455 141 ntBASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Trim38Q5SZ99 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm23390-201ENSMUST00000157393 106 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm25491-201ENSMUST00000158733 308 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm24677-201ENSMUST00000158755 150 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm25936-201ENSMUST00000179952 114 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm17067-202ENSMUST00000180131 123 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm27845-201ENSMUST00000184479 114 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir8090-201ENSMUST00000185078 136 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm29603-201ENSMUST00000186792 334 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm29229-201ENSMUST00000188874 323 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm26922-201ENSMUST00000082687 72 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.7□□□□□ -2.14
Trim38Q5SZ99 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm13714-201ENSMUST00000117313 221 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm9059-201ENSMUST00000118319 183 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm23656-201ENSMUST00000122626 112 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm24229-201ENSMUST00000158830 118 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm38109-201ENSMUST00000195386 181 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm23370-201ENSMUST00000199545 130 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm43976-201ENSMUST00000203637 235 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm44687-201ENSMUST00000204975 235 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.69□□□□□ -2.14
Trim38Q5SZ99 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm23404-201ENSMUST00000082543 97 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm24152-201ENSMUST00000082764 163 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm22685-201ENSMUST00000082848 106 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.69□□□□□ -2.14
Trim38Q5SZ99 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm25541-201ENSMUST00000116888 126 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm11798-201ENSMUST00000119150 421 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm14574-201ENSMUST00000120644 279 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm8121-201ENSMUST00000153583 499 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm26150-201ENSMUST00000157426 151 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm22099-201ENSMUST00000157925 123 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm22803-201ENSMUST00000158049 283 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Trim38Q5SZ99 Gm35736-201ENSMUST00000203681 313 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.68□□□□□ -2.14
Trim38Q5SZ99 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms