Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm22431-201ENSMUST00000158545 107 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23180-201ENSMUST00000158686 125 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm27587-201ENSMUST00000185116 163 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm17906-201ENSMUST00000202480 901 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24536-201ENSMUST00000083144 107 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23097-201ENSMUST00000083448 105 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Mir463-201ENSMUST00000093570 75 ntBASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22048-201ENSMUST00000104721 89 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24594-201ENSMUST00000122502 99 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Mir1904-201ENSMUST00000122702 80 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm20118-201ENSMUST00000187207 162 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10193-201ENSMUST00000188288 231 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm37869-201ENSMUST00000193385 595 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Ear14-201ENSMUST00000049559 468 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25128-201ENSMUST00000083339 76 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm14624-201ENSMUST00000117746 192 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm26424-201ENSMUST00000122530 104 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm6956-201ENSMUST00000134724 546 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm26501-201ENSMUST00000178307 107 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22631-201ENSMUST00000179656 94 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Mir1291-201ENSMUST00000199842 117 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44128-201ENSMUST00000204909 219 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm45366-201ENSMUST00000209828 384 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm5010-201ENSMUST00000213131 260 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm24625-201ENSMUST00000082622 130 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.99□□□□□ -2.25
Ccdc88aQ5SNZ0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm11857-201ENSMUST00000119817 324 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22027-201ENSMUST00000122737 127 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23172-201ENSMUST00000157160 124 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23278-201ENSMUST00000157911 143 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23411-201ENSMUST00000157988 62 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm2962-201ENSMUST00000159266 336 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm7925-201ENSMUST00000166690 401 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm18417-201ENSMUST00000176564 648 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm42570-201ENSMUST00000195937 292 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44655-201ENSMUST00000207768 423 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm44910-201ENSMUST00000208451 396 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Ccdc88aQ5SNZ0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm14785-201ENSMUST00000120185 539 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm27517-201ENSMUST00000184347 236 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm28848-201ENSMUST00000189984 168 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm18296-201ENSMUST00000192475 783 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm37361-201ENSMUST00000194345 132 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm18971-201ENSMUST00000197240 374 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm45207-201ENSMUST00000207469 145 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25079-201ENSMUST00000082529 203 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm26066-201ENSMUST00000083385 109 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm15214-201ENSMUST00000122155 470 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm22082-201ENSMUST00000157587 161 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm25423-201ENSMUST00000157609 107 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm23352-201ENSMUST00000158428 64 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm29661-201ENSMUST00000186781 315 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm29308-201ENSMUST00000188863 315 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm19901-201ENSMUST00000192191 495 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm5034-201ENSMUST00000199115 634 ntBASIC0.97□□□□□ -2.25
Ccdc88aQ5SNZ0 Gm11572-201ENSMUST00000119164 120 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm22482-201ENSMUST00000122563 359 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm25269-201ENSMUST00000122601 104 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm22654-201ENSMUST00000157874 105 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm26435-201ENSMUST00000179026 107 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm24390-201ENSMUST00000179578 62 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm22263-201ENSMUST00000180060 104 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm29037-201ENSMUST00000189092 313 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm38261-201ENSMUST00000192608 316 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm34015-201ENSMUST00000194908 451 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.96□□□□□ -2.26
Ccdc88aQ5SNZ0 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.95□□□□□ -2.26
Ccdc88aQ5SNZ0 Traj60-201ENSMUST00000167781 54 ntBASIC0.95□□□□□ -2.26
Ccdc88aQ5SNZ0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
Ccdc88aQ5SNZ0 Mir7091-201ENSMUST00000184075 79 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms