Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm11794-201ENSMUST00000119446 237 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm17164-201ENSMUST00000169013 506 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Mir224-201ENSMUST00000083608 82 ntBASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.2□□□□□ -2.44
Trav3-1Q5R1I8 Gm25168-201ENSMUST00000104189 132 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm13368-201ENSMUST00000122443 430 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm23542-201ENSMUST00000158208 96 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm9830-201ENSMUST00000178509 357 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm38231-201ENSMUST00000192030 347 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm43556-201ENSMUST00000196186 681 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 AC069561.2-201ENSMUST00000217596 420 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 AC164304.1-201ENSMUST00000226920 272 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm22809-201ENSMUST00000082743 156 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Mir452-201ENSMUST00000093629 85 ntBASIC-0.21□□□□□ -2.44
Trav3-1Q5R1I8 Gm25938-201ENSMUST00000104139 166 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Gm13475-201ENSMUST00000119290 234 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Gm22945-201ENSMUST00000158557 157 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Gm27942-201ENSMUST00000184669 101 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 AC122905.2-201ENSMUST00000220325 269 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Mir193a-201ENSMUST00000083461 66 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Mir500-201ENSMUST00000093600 92 ntBASIC-0.22□□□□□ -2.44
Trav3-1Q5R1I8 Gm12225-201ENSMUST00000117995 298 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm11904-201ENSMUST00000120562 248 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm23862-201ENSMUST00000180342 94 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm29229-201ENSMUST00000188874 323 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Gm24624-201ENSMUST00000082617 164 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.23□□□□□ -2.45
Trav3-1Q5R1I8 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm14599-201ENSMUST00000120469 474 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm15061-201ENSMUST00000121076 1046 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm25253-201ENSMUST00000179958 107 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm27894-201ENSMUST00000184177 92 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm43993-201ENSMUST00000203972 247 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.24□□□□□ -2.45
Trav3-1Q5R1I8 Gm25313-201ENSMUST00000101817 116 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm26082-201ENSMUST00000104070 127 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm25376-201ENSMUST00000104340 133 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm23435-201ENSMUST00000157183 156 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm22228-201ENSMUST00000157364 101 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm24084-201ENSMUST00000175173 137 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm23287-201ENSMUST00000179427 116 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm23143-201ENSMUST00000180137 116 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Mir7052-201ENSMUST00000184821 65 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm26265-202ENSMUST00000196326 133 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm44325-201ENSMUST00000196757 77 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 AC154424.1-201ENSMUST00000225883 799 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Gm24871-201ENSMUST00000083099 116 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Rnu5g-201ENSMUST00000093721 116 ntBASIC-0.25□□□□□ -2.45
Trav3-1Q5R1I8 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm25718-201ENSMUST00000158632 118 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm16546-201ENSMUST00000159442 355 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm22633-201ENSMUST00000179834 107 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Gm4746-201ENSMUST00000120395 2406 ntBASIC-0.26□□□□□ -2.45
Trav3-1Q5R1I8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 Mir3087-201ENSMUST00000199405 56 ntBASIC-0.27□□□□□ -2.45
Trav3-1Q5R1I8 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms